Results 301 - 325 of 362 results out of about 3776 pages. (1.28 seconds)
- mri_ca_register . . . 1 match
- .../norm_multi.mgh multi_one.gca subject1/mri/transforms/talairach_multi.m3d
= Links =
FreeSurfer, FsFast
= Methods Description =
[[http://www.nmr.mgh.harvard.edu/~fischl/reprints/s...
- mri_ca_normalize . . . 1 match
- ...ne.mgh
= Bugs =
None
= See Also =
[[othercommand1]], [[othercommand2]]
= Links =
FreeSurfer, FsFast
= Methods Description =
{{{
??
}}}
= References =
[[References/Lastname###...
- mri_ca_label . . . 1 match
- ... =
|| outvol || output volume ||
= Bugs =
None
= See Also =
[[mri_cc]]
= Links =
FreeSurfer, FsFast
= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
= Au...
- mri_binarize . . . 1 match
- ...om the subject's aseg.mgz
= Bugs =
None
= See Also =
[[mri_extract_label]]
= Links =
FreeSurfer, FsFast
= Reporting Bugs =
Report bugs to < analysis-bugs@nmr.mgh.harvard.edu >...
- mri_average . . . 1 match
- ...2 ==
??
= Bugs =
None
= See Also =
[[othercommand1]], [[othercommand2]]
= Links =
FreeSurfer
= Methods Description =
{{{
description
description
}}}
= References =
[[Reference...
- mri_and . . . 1 match
- ... logical voxel-wise AND on a series of volumes
= Examples =
= Bugs =
= See Also =
= Links =
FreeSurfer
= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>...
- mri_add_xform_to_header . . . 1 match
- ...n =
Adds specified xform to the volume header.
= Examples =
= Bugs =
= See Also =
= Links =
FreeSurfer
= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>...
- mri%nl%align . . . 1 match
- ...ription
= Bugs =
None
= See Also =
[[othercommand1]], [[othercommand2]]
= Links =
FreeSurfer, FsFast
= Methods Description =
{{{
description
description
}}}
= References =
[[R...
- mkxsubjreg . . . 1 match
- ...les =
== Example 1 ==
??
== Example 2 ==
??
= Bugs =
??
= See Also =
??
= Links =
FreeSurfer, FsFast
= Methods Description =
??
= References =
??
= Reporting Bugs =
Report bu...
- mkcontrast-sess . . . 1 match
- ... ==
??
== Example 2 ==
??
= Bugs =
??
= See Also =
[[stxgrinder-sess]]
= Links =
FreeSurfer, FsFast
= Methods Description =
{{{
description
description
}}}
= References =
[[R...
- minc_to_bshort . . . 1 match
- ...
minc_to_bshort file.minc f
= Bugs =
none
= See Also =
[[mri_convert]]
= Links =
FreeSurfer
= Methods Description =
N/A
= References =
none
= Reporting Bugs =
Report bugs to...
- isxavg-re-sess . . . 1 match
- ...bjectfilename>
= Bugs =
None
= See Also =
[[paint-sess]], [[surf-sess]]
= Links =
FreeSurfer, FsFast
= Methods Description =
= References =
[[References/Lastname###]]
= Repor...
- intergroupavg-sess . . . 1 match
- ...he between-group contrast
= Bugs =
None
= See Also =
[[isxavg-re-sess]]
= Links =
FreeSurfer, FsFast
= Methods Description =
= References =
[[References/Lastname###]]
= Repor...
- gwissue_labeledit . . . 1 match
- ...robably want to regard labels:
* "You can also export label files for use in other FreeSurfer programs, or export a collection of anatomical labels as an annotation."
* "You ca...
- gwcode_tksurfer_labelresize . . . 1 match
- ...and also calls the caption sub-frame a Label, and neither of these is related to the FreeSurfer concept of a per-vertex Label.) I am concerned with the subframe termed "Overlay", a...
- func2tal-sess . . . 1 match
- ...e> -sf <subjectfilename> -res 4
= Bugs =
None
= See Also =
[[func2sph]]
= Links =
FreeSurfer, FsFast
= References =
[[References/Lastname###]]
= Reporting Bugs =
Report bugs t...
- func2sph-sess . . . 1 match
- ...jectfilename> -d <subjects_dir>
= Bugs =
None
= See Also =
[[func2tal]]
= Links =
FreeSurfer, FsFast
= Methods Description =
= References =
[[References/Lastname###]]
= Repo...
- fslregister-sess . . . 1 match
- ...ption
= Bugs =
None
= See Also =
[[spmregister-sess]], [[autoreg-sess]]
= Links =
FreeSurfer, FsFast
= Methods Description =
{{{
description
description
}}}
= References =
[[R...
- fsfastrestingstatetutorial . . . 1 match
- ...=== STEP 2: ====
Link your functional data to your anatomical data processed through FreeSurfer. This is done by creating a text file called subjectname with the name (or path) of ...
- epidewarp.fsl . . . 1 match
- ...el resolution, and field-of-view as the EPI. This script uses only FSL commands (ie, FreeSurfer not needed).
For the stock Siemens field map, two field maps are required, one to g...
- autoreg-sess . . . 1 match
- ...ionals)
= Bugs =
None
= See Also =
[[tkregister-sess]], [[tkregister2]]
= Links =
FreeSurfer, FsFast
= Methods Description =
= References =
[[References/Lastname###]]
= Repor...
- TkSurferGuide/TkSurferWorkingWithData/TkSurferLabel . . . 1 match
- ...alues for overlays or time courses. You can also export label files for use in other FreeSurfer programs, or export a collection of anatomical labels as an annotation.
TkSurfer ca...
- TkSurferGuide/TkSurferGeneralUsage/TkSurferQuickStart . . . 1 match
- ...||
= Quick Start =
TkSurfer can be started in any of three ways: launching it from FreeSurfer with the Surface button, using the tksurfer-sess script, and calling it from the com...
- TkSurfer . . . 1 match
- ... cortical surface data. TkSurfer can also display functional or curvature data on the surface. TkSurfer is a tool in the FreeSurfer toolset.
See
* TkSurferGuide
* [[tksurfer]]...
- TkMeditGuide/TkMeditWorkingWithData/TkMeditControlPoints . . . 1 match
- ...es, the {{{control.dat}}} file is saved in the subject's {{{tmp}}} directory, so the FreeSurfer programs that use the file know where to find it. However, if you used the {{{-f}}} ...