Differences between revisions 1 and 22 (spanning 21 versions)
Revision 1 as of 2015-07-14 13:50:12
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Editor: ZekeKaufman
Comment:
Revision 22 as of 2016-07-01 10:54:20
Size: 1624
Editor: ZekeKaufman
Comment:
Deletions are marked like this. Additions are marked like this.
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Checkout out the repository (trunk): == Initial Git Setup (just do once) ==
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Configuration settings:
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# CVS
export CVSROOT=/space/repo/1/dev
cvs checkout dev
$> git config --global user.name "John Doe"
$> git config --global user.email johndoe@nmr.mgh.harvard.edu
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Checkout out the main branch:
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# git
git clone /space/freesurfer/repo/freesurfer

$>
git clone /space/freesurfer/repo/freesurfer
(remotely)
$>

$> cvs checkout dev
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Checkout the stable branch:
{{{
$> git clone -b stable6 /space/freesurfer/repo/freesurfer

$> cvs checkout -r stable6 dev
}}}

== Daily Workflow ==


Commit a modified source code file:
||'''cvs'''||{{{cvs commit -m "Added new capabilities." <file_name>}}}||
||<|2>'''git'''||{{{git commit -m "Added new capabilities." <file_name>}}}||
||{{{git push}}}||

Modify and commit a data file:
||'''cvs'''||{{{cvs commit <file_name>}}}||
||<|5>'''git'''||{{{git annex unlock <file_name>}}}||
||{{{git annex add <file_name>}}}||
||{{{git commit <file_name>}}}||
||{{{git push}}}||
||{{{git annex copy --to origin <file_name>}}}||

Add a data file:
||<|2>'''cvs'''||{{{cvs add <file_name>}}}||
||{{{cvs commit <file_name>}}}||
||<|4>'''git'''||{{{git annex add <file_name>}}}||
||{{{git commit <file_name>}}}||
||{{{git push}}}||
||{{{git annex copy --to origin <file_name>}}}||


Remove data file:
||<|3>'''cvs'''||{{{rm <file_name>}}}||
||{{{cvs rm <file_name>}}}||
||{{{cvs commit -m "Removing <file_name>" <file_name>}}}||
||<|2>'''git'''||{{{git rm <file_name>}}}||
||{{{git commit -m "Removing <file_name>" <file_name>}}}||

Undo 1 commit (before push):
||'''git'''||{{{git reset --soft HEAD~1}}}||
Undo 2 commits:
||'''git'''||{{{git reset --soft HEAD~2}}}||

Initial Git Setup (just do once)

Configuration settings:

$> git config --global user.name "John Doe"
$> git config --global user.email johndoe@nmr.mgh.harvard.edu

Checkout out the main branch:

$> git clone /space/freesurfer/repo/freesurfer
(remotely)
$> 

$> cvs checkout dev

Checkout the stable branch:

$> git clone -b stable6 /space/freesurfer/repo/freesurfer

$> cvs checkout -r stable6 dev

Daily Workflow

Commit a modified source code file:

cvs

cvs commit -m "Added new capabilities." <file_name>

git

git commit -m "Added new capabilities." <file_name>

git push

Modify and commit a data file:

cvs

cvs commit <file_name>

git

git annex unlock <file_name>

git annex add <file_name>

git commit <file_name>

git push

git annex copy --to origin <file_name>

Add a data file:

cvs

cvs add <file_name>

cvs commit <file_name>

git

git annex add <file_name>

git commit <file_name>

git push

git annex copy --to origin <file_name>

Remove data file:

cvs

rm <file_name>

cvs rm <file_name>

cvs commit -m "Removing <file_name>" <file_name>

git

git rm <file_name>

git commit -m "Removing <file_name>" <file_name>

Undo 1 commit (before push):

git

git reset --soft HEAD~1

Undo 2 commits:

git

git reset --soft HEAD~2