Differences between revisions 1 and 6 (spanning 5 versions)
Revision 1 as of 2004-09-08 12:23:27
Size: 302
Editor: DavidTuch
Comment: new page
Revision 6 as of 2008-04-29 11:46:04
Size: 715
Editor: localhost
Comment: converted to 1.6 markup
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
 ["isxavg-fe-sess"] -analysis <analysisname> -group <groupname> -space <spacename> -sf <subjectfilename> -d <directory>  [[isxavg-fe-sess]] -analysis <analysisname> -group <groupname> -space <spacename> -spacedir sphsm<XX> -sf <subjectfilename> -d <directory>
Line 3: Line 3:
 ["stxgrinder-sess"] -analysis <analysisname> -s <groupname> -space <spacename> -sf <subjectfilename> -contrast <contrastname>  [[stxgrinder-sess]] -analysis <analysisname> -s <groupname> -space <spacename> -contrast <1v2>

Note that you should not include all the group members on the stxgrinder-sess command-line, only the name of the group as if it were an individual.
Line 6: Line 8:
Repeat ["stxgrinde-sess"] for all contrasts  * Repeat [[stxgrinder-sess]] for all contrasts.
Line 8: Line 10:
 * Assign the name of the group analysis with the <group> parameter. If the analysis is in TalairachSpace then <space> = tal. If the analysis is in SphericalSpace, then <space> = sph, and -spacedir must be specified from FsFastSphericalSmooth ([[sphsmooth-sess]]).
  • isxavg-fe-sess -analysis <analysisname> -group <groupname> -space <spacename> -spacedir sphsm<XX> -sf <subjectfilename> -d <directory>

    stxgrinder-sess -analysis <analysisname> -s <groupname> -space <spacename> -contrast <1v2>

Note that you should not include all the group members on the stxgrinder-sess command-line, only the name of the group as if it were an individual.

FsFastComputeFixedEffectsAnalysis (last edited 2008-04-29 11:46:04 by localhost)