Differences between revisions 2 and 6 (spanning 4 versions)
⇤ ← Revision 2 as of 2004-09-08 12:23:38 →
Size: 303
Editor: DavidTuch
Comment: fixed typo
← Revision 6 as of 2008-04-29 11:46:04 → ⇥
Size: 715
Editor: localhost
Comment: converted to 1.6 markup
Deletions are marked like this. Additions are marked like this.
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 ["isxavg-fe-sess"] -analysis <analysisname> -group <groupname> -space <spacename> -sf <subjectfilename> -d <directory>  [[isxavg-fe-sess]] -analysis <analysisname> -group <groupname> -space <spacename> -spacedir sphsm<XX> -sf <subjectfilename> -d <directory>
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 ["stxgrinder-sess"] -analysis <analysisname> -s <groupname> -space <spacename> -sf <subjectfilename> -contrast <contrastname>  [[stxgrinder-sess]] -analysis <analysisname> -s <groupname> -space <spacename> -contrast <1v2>

Note that you should not include all the group members on the stxgrinder-sess command-line, only the name of the group as if it were an individual.
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Repeat ["stxgrinder-sess"] for all contrasts  * Repeat [[stxgrinder-sess]] for all contrasts.
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 * Assign the name of the group analysis with the <group> parameter. If the analysis is in TalairachSpace then <space> = tal. If the analysis is in SphericalSpace, then <space> = sph, and -spacedir must be specified from FsFastSphericalSmooth ([[sphsmooth-sess]]).

  • isxavg-fe-sess -analysis <analysisname> -group <groupname> -space <spacename> -spacedir sphsm<XX> -sf <subjectfilename> -d <directory>

    stxgrinder-sess -analysis <analysisname> -s <groupname> -space <spacename> -contrast <1v2>

Note that you should not include all the group members on the stxgrinder-sess command-line, only the name of the group as if it were an individual.

FsFastComputeFixedEffectsAnalysis (last edited 2008-04-29 11:46:04 by localhost)