Diff for "FsTutorial/Oct2010CourseSchedule"

Differences between revisions 12 and 25 (spanning 13 versions)

FreeSurfer Course, October 4 and 5, 2010

MGH, Charlestown Navy Yard, Building 149, Conference Room A

Monday, October 4th - Introduction / Single Subject / Group Analysis

Time	Title	Type	Lecturer
8:00 - 8:30	optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly	tutorial	Allison Stevens
8:30 - 9:00	optional - Intro to FreeSurfer Jargon	talk	Allison Stevens
8:30 - 9:00	Course Registration	sign-in	staff
9:00 - 9:30	Introduction to Freesurfer	talk	Bruce Fischl
9:30 - 10:00	Accuracy, Reliability and Validation	talk	David Salat
10:00 - 11:00	Analyzing the Individual Subject	talk	Doug Greve
11:00 - 11:15	break
11:15 - 11:45	Tkmedit/Tksurfer demonstration	demo	Doug Greve
11:45 - 12:15	Interaction with Individual Subject Data Tutorial	tutorial	staff
12:15 - 1:15	Lunch	--	--
12:30 - 1:00	Optional Lunch Talk- MRI Acquisition Methods for Morphometry	talk	Andre van der Kouwe
1:15 - 2:00	FreeSurfer Applications	talk	David Salat
2:00 - 2:30	Surface-based Smoothing/Surface-based Registration	talk	Doug Greve
2:30 - 2:45	break
2:45 - 3:30	Group Analysis / GLM / Multiple Comparisons	talk	Mert Sabuncu
3:30 - 4:30	Group Analysis / Multiple Comparisons - mri_glmfit Tutorial	tutorial	staff
4:30 - 4:45	QDEC demonstration	demo	Nick Schmansky
4:45 - 5:30	Group Analysis - qdec Tutorial	tutorial	staff
5:30 -	optional - FreeSurfer Installation on Personal Laptops	one-on-one	Nick Schmansky
5:30 -	optional - Start Processing Your Own Data	one-on-one	Allison Stevens

Boston Beer Works location information here.
Meet us at 6:10pm at the front of Building 149 (the entrance on the opposite side of the building from where the Course is held).
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station. From there, you cross the street and go down Canal Street. Boston Beer Works will be on your left.

Tuesday, October 5th - ROIs / Troubleshooting / Multi-Modal / Q&A / Future Directions

Time	Title	Type	Lecturer
9:00 - 10:00	ROI Analysis	talk	Doug Greve
10:00 - 10:30	ROI Analysis Tutorial	tutorial	staff
10:30 - 11:00	Longitudinal FreeSurfer see also: LongitudinalProcessing	talk	Martin Reuter
11:00 - 11:15	break
11:15 - 11:45	Failure Modes	talk	Bruce Fischl
11:45 - 12:45	Troubleshooting Demonstration, Troubleshooting Tutorial	tutorial	staff, Allison
12:45 - 1:45	Lunch	--	--
12:45 - 1:15	Optional Lunch Talk- Quality Checking a Recon	demo	Allison Stevens
1:45 - 3:00	Multi-Modal Integration	talk	Doug Greve
3:00 - 3:45	Multi-Modal Integration Tutorial	tutorial	staff
3:45 - 4:00	break
4:00 - 4:20	Combined Volume and Surface Registration	talk	Lilla Zollei
4:20 - 5:30	Future Directions of FreeSurfer:
4:20 - 4:40	Motion-compensated neuroanatomical imaging	talk	Dylan Tisdall
4:40 - 5:10	Inferring architectonic boundaries from in-vivo MRI	talk	Bruce Fischl
5:10- 5:30	TRActs Constrained by UnderLying Anatomy (TRACULA)	talk	Lilla Zollei
5:30 - 6:00	Question and Answer Session, FsQuiz............FsQuizAnswers	talk	staff

The FreeSurfer Evaluation is here!

FsTutorial/Oct2010CourseSchedule (last edited 2010-10-05 16:28:23 by AllisonStevens)

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-|| 8:30 - 9:00 || '''optional -''' Intro to !FreeSurfer Jargon || talk || Allison Stevens ||
+|| 8:30 - 9:00 || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] || talk || Allison Stevens ||
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+'''Boston Beer Works location information [[http://www.beerworks.net/html/locations_canal.html|here]].'''<<BR>>
Meet us at 6:10pm at the front of Building 149 (the entrance on the opposite side of the building from where the Course is held). <<BR>>
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station. From there, you cross the street and go down Canal Street. Boston Beer Works will be on your left.
-Line 38:
+Line 42:
-|| ''12:45 - 1:15'' || ''Optional Lunch Talk- Quality Checking a Recon'' || ''demo'' || ''Allison Stevens'' ||
|| 1:15 - 1:45 || Lunch || -- || -- ||
+|| 12:45 - 1:45 || '''Lunch''' || -- || -- ||
|| ''12:45 - 1:15'' || ''Optional Lunch Talk- [[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt|Quality Checking a Recon|&do=get]]'' || ''demo'' || ''Allison Stevens'' ||
-Line 43:
+Line 47:
-|| 4:00 - 4:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei ||
|| 4:30 - 5:30 || Future Directions of !FreeSurfer: || || ||
|| 4:30 - 4:50|| [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging|&do=get]] || talk || Dylan Tisdall ||
|| 4:50 - 5:10 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl ||
|| 5:10 - 5:20|| [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Lilla Zollei ||
|| 5:20 - 5:50 || Question and Answer Session, FsQuiz || talk || staff ||
+|| 4:00 - 4:20 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei ||
|| 4:20 - 5:30 || Future Directions of !FreeSurfer: || || ||
|| 4:20 - 4:40|| [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging|&do=get]] || talk || Dylan Tisdall ||
|| 4:40 - 5:10 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl ||
|| 5:10- 5:30|| [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Lilla Zollei ||
|| 5:30 - 6:00 || Question and Answer Session, FsQuiz............FsQuizAnswers || talk || staff ||

'''The !FreeSurfer Evaluation is [[https://spreadsheets.google.com/viewform?formkey=dHM0ZWFSY0owUVoyQmpMR3NTWUt2SHc6MA|here]]!'''