Diff for "FsTutorial/Oct2014CourseSchedule"

Differences between revisions 1 and 8 (spanning 7 versions)

FreeSurfer Course, October 27-29, 2014
MGH, Charlestown Navy Yard, Building 114, Room D1

8:00 - 9:30am Registration Desk Open

Monday, Oct 27th - Introduction / Single Subject Analysis /Troubleshooting

Time	Title	Type	Lecturer
8:30 - 9:00	optional - Unix Tutorial for FreeSurfer Users	tutorial	Allison Stevens
9:00 - 9:15	optional - Intro to FreeSurfer Jargon	talk	Allison Stevens
9:15 - 9:30	break
9:30 - 10:00	Introduction to Freesurfer	talk	Bruce Fischl
10:00 - 11:00	Analyzing the Individual Subject	talk	Doug Greve
11:00 - 11:20	break
11:20 - 12:00	optional - A Non-physicist's Intro to MR SpinBench	talk	Dylan Tisdall
12:00 - 1:00	Lunch (Suggestions for where to eat)	--	--
1:00 - 1:30	Freeview demonstration	demo	Allison Stevens
1:30 - 2:30	Interaction with Individual Subject Data Tutorial	tutorial	staff
2:30 - 3:00	FreeSurfer Troubleshooting	talk	Bruce Fischl
3:00 - 3:20	break
3:20 - 4:00	Quality Checking a Recon	demo	Allison Stevens
4:00 - 5:00	Troubleshooting Tutorial	tutorial	staff
5:00 - 5:15	Question and Answer Session (Answers to online questions here)	talk	staff

Boston Beer Works location information here and here.
Meet us in front of Building 149 to catch the 6:15pm shuttle bus (it leaves on time!).
If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. Boston Beer Works will be down that street, on your right. (If you miss the 6:15 bus, the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).

Tuesday, Oct 28th - Group Analysis / ROI Analysis / Multimodal

Time	Title	Type	Lecturer
9:00 - 9:40	Surface-based Analysis: Intersubject Smoothing & Registration	talk	Doug Greve
9:40 - 10:20	Group Analysis	talk	Martin Reuter
10:20 - 10:40	break
10:40 - 11:20	Group Analysis Tutorial	tutorial	staff
11:20 - 11:40	Multiple Comparisons	talk	Doug Greve
11:40 - 12:00	QDEC demonstration	demo	Martin Reuter
12:00 - 1:00	Lunch	--	--
1:00 - 1:20	Multiple Comparisons Tutorial	tutorial	staff
1:20 - 2:00	QDEC Tutorial	tutorial	staff
2:00 - 2:30	ROI Analysis	talk	Doug Greve
2:30 - 2:50	break
2:50 - 3:20	ROI Analysis Tutorial	tutorial	staff
3:20 - 3:50	Longitudinal FreeSurfer see also: LongitudinalProcessing	talk	Martin Reuter
3:50 - 4:30	Longitudinal Tutorial	tutorial	staff

Wednesday, Oct 29th - Diffusion / Multimodal / Longitudinal / Future Directions / Q&A

Time	Title	Type	Lecturer
9:00 - 9:30	Multi-Modal Integration, Part 1	talk	Doug Greve
9:30 - 10:00	Multi-Modal Integration Tutorial, Part 1	tutorial	staff
10:00 - 10:40	Introduction to Diffusion MRI	talk	Anastasia Yendiki
10:40 - 11:00	break
11:00 - 11:30	Diffusion Processing Tutorial	tutorial	staff
11:30 - 12:00	TRActs Constrained by UnderLying Anatomy (TRACULA)	talk	Anastasia Yendiki
12:00 - 1:00	Lunch	--	--
1:00 - 1:45	Tracula Tutorial	tutorial	staff
1:45 - 2:15	Multi-Modal Integration, Part 2	talk	Doug Greve
2:15 - 3:00	Multi-Modal Integration Tutorial, Part 2	tutorial	staff
3:00 - 3:20	break & Evaluation]]
3:20 - 3:50	optional technical talk - MRI Acquisition Methods for Morphometry	talk	Andre van der Kouwe
3:50 - 4:20	optional technical talk - Motion-compensated neuroanatomical imaging	talk	Dylan Tisdall
4:20 - 4:50	Future Directions	talk	Bruce Fischl
4:50 - 5:05	Question and Answer Session (Answers to online questions here), FsQuiz	talk	staff

FsTutorial/Oct2014CourseSchedule (last edited 2017-09-26 11:34:35 by MorganFogarty)

-  ⇤ ← Revision 1 as of 2014-04-27 14:57:50 → 
  Size: 7620
  Editor: AllisonStevens
  Comment:
+   ← Revision 8 as of 2014-09-30 14:17:38 → ⇥
  Size: 7434
  Editor: AnastasiaYendiki
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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-'''!FreeSurfer Course, May 5-7, 2014 <<BR>>
+'''!FreeSurfer Course, October 27-29, 2014 <<BR>>
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-=== Monday, May 5th - Introduction / Single Subject Analysis /Troubleshooting ===
+=== Monday, Oct 27th - Introduction / Single Subject Analysis /Troubleshooting ===
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-||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||tutorial || Ender Konukoglu ||
||9:00 - 9:15 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt.pptx|Intro to FreeSurfer Jargon|&do=get]] ||talk || Ender Konukoglu ||
+||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||tutorial || Allison Stevens ||
||9:00 - 9:15 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt.pptx|Intro to FreeSurfer Jargon|&do=get]] ||talk || Allison Stevens ||
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-||1:00 - 1:30 ||Freeview demonstration ||demo ||Louis Vinke ||
+||1:00 - 1:30 ||Freeview demonstration ||demo ||Allison Stevens ||
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-Meet us at 6:10pm at the front of Building 149 (map to be provided soon). <<BR>>
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
<<BR>>From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right.
+Meet us in front of [[http://surfer.nmr.mgh.harvard.edu/fswiki/CourseDescription#Map|Building 149]] to catch the 6:15pm shuttle bus (it leaves on time!). <<BR>>
If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. Boston Beer Works will be down that street, on your right. (If you miss the 6:15 bus, the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
-Line 37:
+Line 36:
-=== Tuesday, May 6th - Group Analysis / ROI Analysis / Multimodal ===
+=== Tuesday, Oct 28th - Group Analysis / ROI Analysis / Multimodal ===
-Line 40:
+Line 39:
-||9:40 - 10:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.groupanalysis.ppt|Group Analysis]] ||talk || Ender Konukoglu  ||
+||9:40 - 10:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.groupanalysis.ppt|Group Analysis]] ||talk || Martin Reuter  ||
-Line 44:
+Line 43:
-||11:40 - 12:00 ||QDEC demonstration ||demo || Doug Greve ||
+||11:40 - 12:00 ||QDEC demonstration ||demo || Martin Reuter ||
-Line 48:
+Line 47:
-||2:00 - 2:30  ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||Martin Reuter||
+||2:00 - 2:30  ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.roi.ppt|ROI Analysis|&do=get]] ||talk || Doug Greve ||
-Line 54:
+Line 53:
-=== Wednesday, Nov 6th - Diffusion / Multimodal / Longitudinal / Future Directions / Q&A ===
+=== Wednesday, Oct 29th - Diffusion / Multimodal / Longitudinal / Future Directions / Q&A ===
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+Line 55:
-Line 64:
+Line 62:
-||11:30 - 12:10 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] ||talk ||Anastasia Yendiki ||
||12:10 - 1:10 ||'''Lunch''' ||-- ||-- ||
||1:10 - 1:55 ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||staff ||
||1:55 - 2:25 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.multimodal-integration.ppt|Multi-Modal Integration, Part 2|&do=get]] ||talk ||Doug Greve ||
||2:25 - 3:10||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial, Part 2]] ||tutorial ||staff ||
||3:10 - 3:30 ||'''break''' & [[https://docs.google.com/spreadsheet/viewform?formkey=dDNaOUNxUF90NDJJOWdLNUx3Z2RiMHc6MA|Evaluation]]|| ||
||3:30 - 4:00 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe ||
||4:00 - 4:30 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]] ||talk ||Dylan Tisdall ||
||4:30 - 4:55 || '''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.registration.ppt|Registration Methods|&do=get]] || talk || Lilla Zollei ||
||4:55 - 5:25 ||Future Directions  ||talk || Bruce Fischl, Lilla Zollei, Ender Konukoglu ||
||5:25 - 5:40 ||Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]), FsQuiz ||talk ||staff ||
+||11:30 - 12:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] ||talk ||Anastasia Yendiki ||
||12:00 - 1:00 ||'''Lunch''' ||-- ||-- ||
||1:00 - 1:45 ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||staff ||
||1:45 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.multimodal-integration.ppt|Multi-Modal Integration, Part 2|&do=get]] ||talk ||Doug Greve ||
||2:15 - 3:00||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial, Part 2]] ||tutorial ||staff ||
||3:00 - 3:20 ||'''break''' & Evaluation]]|| ||
||3:20 - 3:50 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe ||
||3:50 - 4:20 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]] ||talk ||Dylan Tisdall ||
||4:20 - 4:50 ||Future Directions  ||talk || Bruce Fischl ||
||4:50 - 5:05 ||Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]), FsQuiz ||talk ||staff ||