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||ReconAllFilesVsSteps||Cross-reference table showing files read and written by each step in recon-all||
||LabelsClutsAnnotationFiles||Article on labels, colortables and annotations ||
||QaImageScripts||Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA ||
||'''Concepts'''|| ||
||<^>
ReconAllFilesVsSteps||Cross-reference table showing files read and written by each step in recon-all||
||<^>LabelsClutsAnnotationFiles||Article on '''labels''', '''colortables''' and '''annotations''' ||
||<^>RegTemplateParcAtlas ||Overview: [[BR]] --Creating and using '''"tif" templates''' for spherical registration of surfaces[[BR]] --Creating and using '''GCA atlas files''' for parcellation||
|| || ||
||'''Scripts'''|| ||
||<^>
QaImageScripts||Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA ||
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||["mris_register"]|| ||

GrahamWideman pages

Useful pages

Link

Description

Concepts

ReconAllFilesVsSteps

Cross-reference table showing files read and written by each step in recon-all

LabelsClutsAnnotationFiles

Article on labels, colortables and annotations

RegTemplateParcAtlas

Overview: BR --Creating and using "tif" templates for spherical registration of surfacesBR --Creating and using GCA atlas files for parcellation

Scripts

QaImageScripts

Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA

Commands

(... for which I wrote some documentation)

["mris_curvature_stats"]

["mris_label2annot"]

["mri_annotation2label"]

["mris_make_template"]

["mri_make_template"]

["mris_register"]

Test Pages

GrahamWideman (last edited 2013-10-10 03:40:06 by GrahamWideman)