Differences between revisions 32 and 41 (spanning 9 versions)

GrahamWideman pages

Useful pages

Link	Description
Concepts
ReconAllFilesVsSteps	Cross-reference table showing files read and written by each step in recon-all
LabelsClutsAnnotationFiles	Article on labels, colortables and annotations
RegTemplateParcAtlas	Overview: BR --Creating and using "tif" templates for spherical registration of surfacesBR --Creating and using GCA atlas files for parcellation

Scripts
QaImageScripts	Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA

Commands	(... for which I wrote some documentation)
["mris_curvature_stats"]
["mris_label2annot"]
["mri_annotation2label"]
["mris_make_template"]
["mri_make_template"]
["mris_register"]

Test Pages

GrahamWideman
GrahamWideman/MoinEditorBackup
GrahamWidemanTest01
GrahamWidemanTest02
GrWiAccessControlTest
GrWiTestNewPage

-  ⇤ ← Revision 32 as of 2008-01-22 01:47:43 → 
  Size: 1312
  Editor: GrahamWideman
  Comment:
+   ← Revision 41 as of 2008-01-24 04:17:00 → ⇥
  Size: 1147
  Editor: GrahamWideman
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 5:
-||'''Link'''||'''Description'''||
||ReconAllFilesVsSteps||Cross-reference table showing files read and written by each step in recon-all||
||LabelsClutsAnnotationFiles||Article on labels, colortables and annotations ||
||RegTemplateParcAtlas||Creating and using "tif" templates for spherical registration of surfaces and GCA atlas files for parcellation||
||...RegTemplateParcAtlas/TemplateCreate||Creating a template for spherical registration (mris_make_template)||
||...RegTemplateParcAtlas/TemplateUse||Using a template (mris_register)||
||...RegTemplateParcAtlas/AtlasCreate||Creating an atlas for parcellation (mris_ca_train) ||
||...RegTemplateParcAtlas/AtlasUse||Parcellation by applying an atlas (mris_ca_label)||
+||<#D0D0D0>'''Link'''||<#D0D0D0>'''Description'''||
||'''Concepts'''|| ||
||<^>ReconAllFilesVsSteps||Cross-reference table showing files read and written by each step in recon-all||
||<^>LabelsClutsAnnotationFiles||Article on '''labels''', '''colortables''' and '''annotations''' ||
||<^>RegTemplateParcAtlas ||Overview: [[BR]] --Creating and using '''"tif" templates''' for spherical registration of surfaces[[BR]] --Creating and using '''GCA atlas files''' for parcellation||
-Line 14:
+Line 11:
-||QaImageScripts||Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA ||
+||<#D0D0D0>'''Scripts'''||<#D0D0D0> ||
||<^>QaImageScripts||Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA ||
-Line 16:
+Line 14:
-||'''Commands'''||(... for which I wrote some documentation) ||
+||<#D0D0D0>'''Commands'''||<#D0D0D0>(... for which I wrote some documentation) ||
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+||["mris_register"]|| ||