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Describe GrahamWideman here. = GrahamWideman pages =
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Just a test. == Useful pages ==
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Emphasis:
''italics''; '''bold'''; '''''bold italics'''''; ''mixed '''bold''' and italics''; ---- horizontal rule.
Headings:
= Title 1 =; == Title 2 ==; === Title 3 ===; ==== Title 4 ====; ===== Title 5 =====.
Lists:
space and one of * bullets; 1., a., A., i., I. numbered items; 1.#n start numbering at n; space alone indents.
Links:
JoinCapitalizedWords; ["brackets and double quotes"]; url; [url]; [url label].
Tables:
|| cell text |||| cell text spanning two columns ||; no trailing white space allowed after tables or titles.
----
CategoryCategory
||'''Link'''||'''Description'''||
||<^>ReconAllFilesVsSteps||Cross-reference table showing files read and written by each step in recon-all||
||<^>LabelsClutsAnnotationFiles||Article on labels, colortables and annotations ||
||<^>RegTemplateParcAtlas||Creating and using "tif" templates for spherical registration of surfaces and GCA atlas files for parcellation||
||<^>...RegTemplateParcAtlas/TemplateCreate||Creating a template for spherical registration (mris_make_template)||
||<^>...RegTemplateParcAtlas/TemplateUse||Using a template (mris_register)||
||<^>...RegTemplateParcAtlas/AtlasCreate||Creating an atlas for parcellation (mris_ca_train) ||
||<^>...RegTemplateParcAtlas/AtlasUse||Parcellation by applying an atlas (mris_ca_label)||
||<^> || ||
||<^>QaImageScripts||Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA ||
|| || ||
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 General table layout and HTML like options::
 ||||||<tablewidth="80%" tablecellspacing="0">'''Heading'''||
 ||cell 1||cell2||cell 3||
 ||<rowspan=2> spanning rows||||<bgcolor='#E0E0FF'> spanning 2 columns||
 ||<rowbgcolor="#FFFFE0">cell2||cell 3||
 Cell width::
 || narrow ||<:99%> wide ||
 Spanning rows and columns::
 ||<|2> 2 rows || row 1 ||
 || row 2 ||
 ||<-2> row 3 over 2 columns ||
 Alignment::
 ||<(> left ||<^|3> top ||<v|3> bottom ||
 ||<:> centered ||
 ||<)> right ||
 Colors::
 ||<#FF8080> red ||<#80FF80> green ||<#8080FF> blue ||
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||'''Commands'''||(... for which I wrote some documentation) ||
||["mris_curvature_stats"] || ||
||["mris_label2annot"] || ||
||["mri_annotation2label"]|| ||
||["mris_make_template"]|| ||
||["mri_make_template"]|| ||
|| || ||

== Test Pages ==

 * GrahamWideman
 * GrahamWideman/MoinEditorBackup
 * GrahamWidemanTest01
 * GrahamWidemanTest02
 * GrWiAccessControlTest
 * GrWiTestNewPage
 

GrahamWideman pages

Useful pages

Link

Description

ReconAllFilesVsSteps

Cross-reference table showing files read and written by each step in recon-all

LabelsClutsAnnotationFiles

Article on labels, colortables and annotations

RegTemplateParcAtlas

Creating and using "tif" templates for spherical registration of surfaces and GCA atlas files for parcellation

...RegTemplateParcAtlas/TemplateCreate

Creating a template for spherical registration (mris_make_template)

...RegTemplateParcAtlas/TemplateUse

Using a template (mris_register)

...RegTemplateParcAtlas/AtlasCreate

Creating an atlas for parcellation (mris_ca_train)

...RegTemplateParcAtlas/AtlasUse

Parcellation by applying an atlas (mris_ca_label)

QaImageScripts

Sample scripts to produce "screencaps" en masse from tksurfer and tkmedit for QA

Commands

(... for which I wrote some documentation)

["mris_curvature_stats"]

["mris_label2annot"]

["mri_annotation2label"]

["mris_make_template"]

["mri_make_template"]

Test Pages

GrahamWideman (last edited 2013-10-10 03:40:06 by GrahamWideman)