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V1 Atlas

To create these label:

recon-all -s subjid -label-v1

This will output:

  • <subjid>/label/?h.v1.prob.label - contains stat values

  • <subjid>/label/?h.v1.predict.label - thresholded

Note: This requires the subject found in $FREESURFER_HOME/subjects/V1_average to be located (symlinked or copied) in your $SUBJECTS_DIR.

See also BrodmannAreaMaps.

Note: To adjust the display to account for the probabilities in the label in tksurfer, try going to Tools->Label->Threshold Selected Label, then choose a threshold between 0 and 1.

V1 (last edited 2021-09-22 11:41:59 by DevaniCordero)