Index

Name

command - 1/2 sentence summary

Synopsis

command argA argB -flag1 arg1 -flag2 arg2 [-flag3 arg3] [-flag4 arg4]

Arguments

Positional Arguments

argA

brief description

detailed description (eg, help file information)

argB

brief description

detailed description (eg, help file information)

Required Flagged Arguments

--s subject

FreeSurfer subject name

--mov volid

input/movable volume

--reg register.dat

output registration file

Optional Flagged Arguments

-flag3 arg3

brief description

detailed description (eg, help file information)

-flag4 arg4

brief description

detailed description (eg, help file information)

Outputs

volume1

description

volume2

description

Description

type bbregister --help to get the full help on this.

Examples

Example 1

Intialize with FLIRT, view result with tkregister2:

Example 2

Intialize with SPM, view result with tkregister2:

== Example 3 ==

Register a partial FoV using whole FoV as intermdediate:

Bugs

None

See Also

othercommand1, othercommand2

Links

FreeSurfer, FsFast

Methods Description

description
description

References

References/Lastname###

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

JaneSmith