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inorm-sess -s [sessid] or -sf [sessidfile] -d [srchdir] or -df [srchdirfile] [<options>] inorm-sess {-s [sessid] or -sf [sessidfile]} {-d [srchdir] or -df [srchdirfile]} [<options>]
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   -thresh  threshold : fraction of global mean to separate brain and air -thresh [threshold]
fraction of global mean to separate brain and air
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   -motioncor : inorm the motion corrected volumes -motioncor
 
inorm the motion corrected volumes
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   -funcstem stem     : stem of functional volume (default: f or fmc) -funcstem [stem]
stem of functional volume (default: f or fmc)
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   -rlf runlistfile   : -rlf [runlistfile]
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   -umask umask       : set unix file permission mask -umask [umask]
set unix file permission mask
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   -version           : print version and exit -version
print version and exit
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= Description =
description
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command foo -i f -o out inorm-sess foo -i f -o out
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command foo -i f -o out -f fvalue inorm-sess foo -i f -o out -f fvalue
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JaneSmith DougGreve
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= Description =
description
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## For example: ["Belliveau1991"]
NameYear
References/NameYear
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## Suitable for cutting and pasting into publication.
## No WikiLinks should be used.
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## For example: CategoryFreeSurferCommandVolumeConversion
Category``Stream``Function
CategoryFsFastCommandIntensityNormalization

Name

inorm-sess

Synopsis

inorm-sess {-s [sessid] or -sf [sessidfile]} {-d [srchdir] or -df [srchdirfile]}  [<options>]

Positional Arguments

none

Required Flagged Arguments

-s [sessid] or -sf [sessidfile] 
  description

-d [srchdir] or -df [srchdirfile] 
  description

Optional Flagged Arguments

-thresh [threshold]
  fraction of global mean to separate brain and air

-motioncor         
  inorm the motion corrected volumes

-funcstem [stem]
  stem of functional volume (default: f or fmc)

-rlf [runlistfile]

-umask [umask]
  set unix file permission mask

-version
  print version and exit

Outputs

volume1 - description
volume2 - description

Description

description

Example 1

inorm-sess foo -i f -o out

description

Example 2

inorm-sess foo -i f -o out -f fvalue

description

See Also

["othercommand1"], ["othercommand2"]

Author/s

DougGreve

Links

FreeSurfer, FsFast

References

References/NameYear

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Methods Description

description
description

Category

CategoryFsFastCommandIntensityNormalization

inorm-sess (last edited 2008-04-29 11:45:34 by localhost)