|
Size: 1688
Comment: new page
|
← Revision 8 as of 2008-04-29 11:46:24 ⇥
Size: 1440
Comment: converted to 1.6 markup
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 10: | Line 10: |
| [[TableOfContents]] |
<<TableOfContents>> |
| Line 14: | Line 13: |
| mkxsubjreg- 1/2 sentence summary | mkxsubjreg - creates new registration matrix between functional and orig volumes |
| Line 17: | Line 16: |
| command argA argB -flag1 arg1 -flag2 arg2 [-flag3 arg3] [-flag4 arg4] | mkxsubjreg --srcreg <srcreg.dat> --targreg <targreg.dat> |
| Line 21: | Line 20: |
| || argA || brief description || detailed description (eg, help file information) || || argB || brief description || detailed description (eg, help file information) || |
none |
| Line 25: | Line 23: |
| || -flag1 arg1 || brief description || detailed description (eg, help file information) || || -flag2 arg2 || brief description || detailed description (eg, help file information) || |
|| --srcreg <srcreg.dat> || || --targreg <targreg.dat>|| |
| Line 29: | Line 27: |
| || -flag3 arg3 || brief description ||detailed description (eg, help file information) || || -flag4 arg4 || brief description ||detailed description (eg, help file information) || |
|| --targsubj <subjid> || default is talairach || || --xfm <xfmrname> || xfm file name relative to transforms || || --sd <subjects_dir> || default is env SUBJECTS_DIR || || --fvol <funcvol> || path to example functional volume || || --help || || --version || |
| Line 33: | Line 35: |
| || volume1 || description || || volume2 || description || |
?? |
| Line 37: | Line 38: |
| description | mkxsubjreg creates new registration matrix that maps from the functional volume of the source subject to the orig of the target subject through the talairach transform. |
| Line 41: | Line 42: |
| command foo -i f -o out description |
?? |
| Line 46: | Line 44: |
| command foo -i f -o out -f fvalue description |
?? |
| Line 51: | Line 47: |
| None | ?? |
| Line 54: | Line 50: |
| ["othercommand1"], ["othercommand2"] | ?? |
| Line 60: | Line 56: |
| {{{ description description }}} |
?? |
| Line 66: | Line 59: |
| ["References/Lastname###"] | ?? |
| Line 72: | Line 65: |
| JaneSmith | DougGreve |
Index
Contents
Name
mkxsubjreg - creates new registration matrix between functional and orig volumes
Synopsis
mkxsubjreg --srcreg <srcreg.dat> --targreg <targreg.dat>
Arguments
Positional Arguments
none
Required Flagged Arguments
--srcreg <srcreg.dat> |
--targreg <targreg.dat> |
Optional Flagged Arguments
--targsubj <subjid> |
default is talairach |
--xfm <xfmrname> |
xfm file name relative to transforms |
--sd <subjects_dir> |
default is env SUBJECTS_DIR |
--fvol <funcvol> |
path to example functional volume |
--help |
|
--version |
Outputs
??
Description
mkxsubjreg creates new registration matrix that maps from the functional volume of the source subject to the orig of the target subject through the talairach transform.
Examples
Example 1
??
Example 2
??
Bugs
??
See Also
??
Links
Methods Description
??
References
??
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>