Index
Contents
Name
mri_strip_skull - a binary that strips the skull
Synopsis
mri_strip_skull [-]name <tri_file|option> [-] [-tcl script]
Arguments
Positional Arguments
[-] prefix on name  | 
  don't read MRI images  | 
  
  | 
[-] lone dash  | 
  infile is outfile  | 
  infile is outfile|cmdline (not sphere), skip scripts  | 
Options
option  | 
  infile (~/bem)  | 
  outfile (~/bem)  | 
  datfile (cwd)  | 
0  | 
  ic4.tri  | 
  [none]  | 
  [none-defaults], images written to ~/mri/tmp  | 
1(script)  | 
  ic4.tri  | 
  brain.tri +images  | 
  brain.dat, images written to ~/mri/brain  | 
2(script)  | 
  ic4.tri  | 
  inner_skull.tri  | 
  inner_skull.dat, images written to ~/mri/tmp  | 
3(script)  | 
  ic4.tri  | 
  outer_skull.tri  | 
  outer_skull.dat, images written to ~/mri/tmp  | 
4(script)  | 
  ic4.tri  | 
  outer_skin.tri  | 
  outer_skin.dat, images written to ~/mri/tmp  | 
fname  | 
  fname  | 
  fname  | 
  [none--defaults], images written to ~/mri/tmp  | 
Required Flagged Arguments
name  | 
  subject name  | 
  name of subject within already defined SUBJECTS_DIR  | 
Optional Flagged Arguments
tcl script (movies)  | 
  
  | 
  use option=0  | 
Outputs
see options above
Description
Examples
Example 2
description
Bugs
None
See Also
Links
Methods Description
References
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
