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|| ?? || ?? || Tabular output includes the following:
    number of vertices
    total surface area (mm^2)
    total gray matter volume (mm^3)
    average cortical thickness +- standard error (mm)
    integrated rectified mean curvature
    integrated rectified Gaussian curvature
    folding index
    intrinsic curvature index
    structure name
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?? mris_anatomical_stats -a subjid/label/lh.aparc.annot -b subjid lh

Index TableOfContents

Name

mris_anatomical_stats - measures a number of anatomical properties

Synopsis

mris_anatomical_stats [options] <subjectname> <hemi> [<surfacename>]

Arguments

Required Positional Arguments

<subjectname>

subject name

<hemi>

hemisphere

Optional Positional Arguments

<surfacename>

surface name

Required Flagged Arguments

none

Optional Flagged Arguments

-i <low thresh> <hi thresh>

only consider thicknesses in the specified range.

-l <label file>

limit calculations to specified label

-t <thickness file>

use specified file for computing thickness statistics

-a <annotation file>

compute properties for each label in the annotation file separately

-b

tabular output

Outputs

Tabular output includes the following:

  • number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard error (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name

Description

["mris_anatomical_stats"] computes a number of anatomical properties

Examples

Example 1

mris_anatomical_stats -a subjid/label/lh.aparc.annot -b subjid lh

Example 2

??

Bugs

none

See Also

["othercommand1"], ["othercommand2"]

Links

FreeSurfer

Methods Description

??

References

["References/Lastname###"]

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

BruceFischl

mris_anatomical_stats (last edited 2017-11-30 18:18:02 by MorganFogarty)