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'''Index'''
<<TableOfContents>>


= Name =
tkmedit-sess - viewing functional results on the anatomical volume

= Synopsis =
tkmedit-sess -volid FSVolId -analysis <analysisname> [OPTIONS]

= Arguments =
== Positional Arguments ==
None

== Required Flagged Arguments ==
|| -volid FSVolId || name of volume under subject/mri ||
|| -analysis analysisname || name of session-level functional analysis ||

== Optional Flagged Arguments ==
|| -s || sessid (only one allowed) ||
|| -isxavg || method (fixed or random) ||
|| -contrast contrastname || contrast name ||
|| -map || mapname <sig>, minsig, iminsig, t ||
|| -mapanalysis analysisname || name of session-level functional analysis ||
|| -mapsess || sessid from which to get the map||
|| -mapisxavg || method ||
|| -space spacename || native or tal ||
|| -d || sessdir ... ||
|| -sessanat || use session 3d anatomical instead of recon ||
|| -fsd dir || functional subdirectory (bold) ||
|| -asd dir || anatomical subdirectory (3danat) ||
|| -seg segvol segcolor || segment vol and color ||
|| -aseg || show automatic segmentation (must already exist) ||
|| -segopacity opacity || between 0 and 1 (def .3) ||
|| -scriptonly || don't run, just generate a script ||
|| -umask umask || set unix file permission mask ||
|| -version || print version and exit ||
|| -fthresh thresh || minimum threshold for display (2) ||
|| -fsat thresh || saturation threshold for display ||
|| -static || use statically linked version ||
= Outputs =
<??> ???


= Description =
This command is used to view functional results on an anatomical volume.  TkMedit is started by one of three methods: launching it from FreeSurfer with the EditVol button, using
the tkmedit-sess script, and calling it from the command line.

= Examples =
== Example 1 ==
???


= Bugs =
???

= See Also =
[[othercommand1]]

= Links =
FreeSurfer, FsFast

= Methods Description =
{{{
???
}}}

= References =
[[References/Lastname###]]

= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

= Author/s =
DougGreve