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{{{
tksurfer - 1/2 sentence summary
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tksurfer - surfer visualizer
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{{{
tksurfer [argA] -flag1 [arg2] -flag2 [arg3] [<options>]
}}}
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= Positional Arguments =
{{{
[argA]
  description
}}}
{{{tksurfer [subject hemisphere surface] [options ...]}}}
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{{{
-flag1 [arg1]
  description
  description
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-flag2 [arg2]
  description
  description
}}}
||subject||subject in which to look, inside {{{$SUBJECTS_DIR}}}||
||hemisphere||{{{lh}}} or {{{rh}}}||
||surface||name of the surface file||

These arguments are used to build a file name. The file will be:

{{{$SUBJECTS_DIR/subject/hemisphere.surface}}}
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{{{
-flag3 [arg3]
  description
  description
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-flag4 [arg4]
  description
  description
}}}

= Outputs =
{{{
volume1 - description
volume2 - description
}}}

Name

tksurfer - surfer visualizer

Synopsis

tksurfer [subject hemisphere surface] [options ...]

Required Flagged Arguments

subject

subject in which to look, inside $SUBJECTS_DIR

hemisphere

lh or rh

surface

name of the surface file

These arguments are used to build a file name. The file will be:

$SUBJECTS_DIR/subject/hemisphere.surface

Optional Flagged Arguments

Example 1

tksurfer foo -i f -o out

Example 2

tksurfer foo -i f -o out -f fvalue

See Also

["othercommand1"], ["othercommand2"]

Author/s

KevinTeich

Links

FreeSurfer, TkSurfer

Description

description

References

NameYear

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Methods Description

description
description

Category

CategoryFreeSurferApplication

tksurfer (last edited 2011-06-27 12:05:43 by LouisVinke)