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[[TableOfContents]]

Fixing Common Topological Defects

TableOfContents

Motivation

Why do we need to fix topological defects?

  • Non-unique mapping to sphere

Why do topological defects occur?

  • Segmentation errors
  • Fill errors

Manual

  • Holes
    • WM classified as non-WM
    • Fix by filling
      • Example: filling ventricle
  • Handles
    • non-WM classified as WM
    • Fix by cutting
      • Example: removing optic nerve
  • (Other areas: fornix, basal ganglia, temporal strands)

Automatic