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| This tutorial steps you through the analysis of an fMRI data set with the [[http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurfer|FreeSurfer]] Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps: | |
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| This tutorial steps you through the analysis of an fMRI data set with the [[http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurfer|FreeSurfer]] Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps. |
. [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/TutorialData_freeview|A. Tutorial Data: Understanding, Downloading, Setting up]] . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastDirStruct_freeview|B. Understanding the FS-FAST Directory Structure]] . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc_freeview|C. FS-FAST Preprocessing]] . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastFirstLevel_freeview|D. FS-FAST First Level (Time Series) Analysis]] . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastGroupLevel_freeview|E. FS-FAST Group Analysis]] |
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[[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/TutorialData_freeview|A. Tutorial Data: Understanding, Downloading, Setting up]] [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastDirStruct_freeview|B. Understanding the FS-FAST Directory Structure]] [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc_freeview|C. FS-FAST Preprocessing]] [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastFirstLevel_freeview|D. FS-FAST First Level (Time Series) Analysis]] [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastGroupLevel_freeview|E. FS-FAST Group Analysis]] |
Presentations that might be helpful: |
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| Presentations that might be helpful: | |
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1. [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Introduction to fMRI Analysis]] (General, not FS-FAST Specific) 1. [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|Introduction to fMRI Analysis with FSFAST]] 1. [[http://nmr.mgh.harvard.edu/~greve/fsfast.intro.ppt|Extended description of FSFAST]] |
* [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Introduction to fMRI Analysis]] (General, not FS-FAST Specific) * [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|Introduction to fMRI Analysis with FSFAST]] * [[http://nmr.mgh.harvard.edu/~greve/fsfast.intro.ppt|Extended description of FSFAST]] |
This tutorial steps you through the analysis of an fMRI data set with the FreeSurfer Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps:
E. FS-FAST Group Analysis Presentations that might be helpful:
Introduction to fMRI Analysis (General, not FS-FAST Specific)