ces.bb.stats
# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.49 2008/12/21 18:04:28 greve Exp $ # cmdline mri_segstats --seg /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz --ctab /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt --id 1021 --id 1022 --id 1030 --id 17 --i fbirn-101/ces.anat.bb.mgh --sum fbirn-101/ces.bb.stats # sysname Linux # hostname crash # machine x86_64 # user greve # anatomy_type volume # # SegVolFile /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz # SegVolFileTimeStamp 2009/01/09 16:21:30 # ColorTable /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt # ColorTableTimeStamp 2008/12/31 11:38:16 # InVolFile fbirn-101/ces.anat.bb.mgh # InVolFileTimeStamp 2009/01/12 17:18:36 # InVolFrame 0 # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader Mean # TableCol 6 FieldName Intensity Mean # TableCol 6 Units unknown # TableCol 7 ColHeader StdDev # TableCol 7 FieldName Itensity StdDev # TableCol 7 Units unknown # TableCol 8 ColHeader Min # TableCol 8 FieldName Intensity Min # TableCol 8 Units unknown # TableCol 9 ColHeader Max # TableCol 9 FieldName Intensity Max # TableCol 9 Units unknown # TableCol 10 ColHeader Range # TableCol 10 FieldName Intensity Range # TableCol 10 Units unknown # NRows 4 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName Mean StdDev Min Max Range 1 1021 2586 2586.0 ctx-lh-pericalcarine 112.9913 146.7164 -64.4940 713.9155 778.4095 2 1022 12413 12413.0 ctx-lh-postcentral 25.1984 75.2930 -232.6694 461.8479 694.5173 3 1030 15147 15147.0 ctx-lh-superiortemporal 27.9277 71.8605 -143.5521 461.8479 605.4000 4 17 4385 4385.0 Left-Hippocampus 1.2871 23.2438 -113.9432 116.7186 230.6618
ces.abs-masked.bb.stats
# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.49 2008/12/21 18:04:28 greve Exp $ # cmdline mri_segstats --seg /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz --ctab /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt --id 1021 --id 1022 --id 1030 --id 17 --i fbirn-101/ces.anat.bb.mgh --sum fbirn-101/ces.abs-masked.bb.stats --mask fbirn-101/sig.anat.bb.mgh --maskthresh 2 --masksign abs # sysname Linux # hostname crash # machine x86_64 # user greve # anatomy_type volume # # SegVolFile /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz # SegVolFileTimeStamp 2009/01/09 16:21:30 # ColorTable /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt # ColorTableTimeStamp 2008/12/31 11:38:16 # MaskVolFile fbirn-101/sig.anat.bb.mgh # MaskVolFileTimeStamp 2009/01/12 17:18:34 # MaskThresh 2.000000 # MaskSign abs # MaskFrame 0 # MaskInvert 0 # InVolFile fbirn-101/ces.anat.bb.mgh # InVolFileTimeStamp 2009/01/12 17:18:36 # InVolFrame 0 # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader Mean # TableCol 6 FieldName Intensity Mean # TableCol 6 Units unknown # TableCol 7 ColHeader StdDev # TableCol 7 FieldName Itensity StdDev # TableCol 7 Units unknown # TableCol 8 ColHeader Min # TableCol 8 FieldName Intensity Min # TableCol 8 Units unknown # TableCol 9 ColHeader Max # TableCol 9 FieldName Intensity Max # TableCol 9 Units unknown # TableCol 10 ColHeader Range # TableCol 10 FieldName Intensity Range # TableCol 10 Units unknown # NRows 4 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName Mean StdDev Min Max Range 1 1021 1512 1512.0 ctx-lh-pericalcarine 181.3009 158.2677 -64.4940 713.9155 778.4095 2 1022 5646 5646.0 ctx-lh-postcentral 58.9122 98.6236 -232.6694 461.8479 694.5173 3 1030 5203 5203.0 ctx-lh-superiortemporal 82.4339 96.9492 -143.5521 461.8479 605.4000 4 17 116 116.0 Left-Hippocampus 16.8604 64.3484 -113.9432 116.7186 230.6618
ces.pos-masked.bb.stats
# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.49 2008/12/21 18:04:28 greve Exp $ # cmdline mri_segstats --seg /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz --ctab /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt --id 1021 --id 1022 --id 1030 --id 17 --i fbirn-101/ces.anat.bb.mgh --sum fbirn-101/ces.pos-masked.bb.stats --mask fbirn-101/sig.anat.bb.mgh --maskthresh 2 --masksign pos # sysname Linux # hostname crash # machine x86_64 # user greve # anatomy_type volume # # SegVolFile /homes/4/greve/subjects/fbirn-anat-101.v4/mri/aparc+aseg.mgz # SegVolFileTimeStamp 2009/01/09 16:21:30 # ColorTable /space/crash/1/users/greve/freesurferx86/FreeSurferColorLUT.txt # ColorTableTimeStamp 2008/12/31 11:38:16 # MaskVolFile fbirn-101/sig.anat.bb.mgh # MaskVolFileTimeStamp 2009/01/12 17:18:34 # MaskThresh 2.000000 # MaskSign pos # MaskFrame 0 # MaskInvert 0 # InVolFile fbirn-101/ces.anat.bb.mgh # InVolFileTimeStamp 2009/01/12 17:18:36 # InVolFrame 0 # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader Mean # TableCol 6 FieldName Intensity Mean # TableCol 6 Units unknown # TableCol 7 ColHeader StdDev # TableCol 7 FieldName Itensity StdDev # TableCol 7 Units unknown # TableCol 8 ColHeader Min # TableCol 8 FieldName Intensity Min # TableCol 8 Units unknown # TableCol 9 ColHeader Max # TableCol 9 FieldName Intensity Max # TableCol 9 Units unknown # TableCol 10 ColHeader Range # TableCol 10 FieldName Intensity Range # TableCol 10 Units unknown # NRows 4 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName Mean StdDev Min Max Range 1 1021 1408 1408.0 ctx-lh-pericalcarine 198.2415 150.7281 32.1526 713.9155 681.7629 2 1022 4077 4077.0 ctx-lh-postcentral 105.7526 71.4035 19.5321 461.8479 442.3158 3 1030 4382 4382.0 ctx-lh-superiortemporal 107.1893 84.5353 25.4251 461.8479 436.4228 4 17 57 57.0 Left-Hippocampus 77.5613 28.2381 43.2457 116.7186 73.4729
ces.pos-masked.vol.stats
Measure:volume ctx-lh-pericalcarine ctx-lh-postcentral ctx-lh-superiortemporal Left-Hippocampus 0 1408.0 4077.0 4382.0 57.0 1 1246.0 4780.0 4049.0 186.0 2 609.0 4057.0 2990.0 121.0 3 843.0 2928.0 2236.0 146.0 4 1614.0 4003.0 3873.0 232.0
ces.abs-masked.mean.stats
Measure:mean ctx-lh-pericalcarine ctx-lh-postcentral ctx-lh-superiortemporal Left-Hippocampus 0 181.3009 58.9122 82.4339 16.8604 1 162.6065 70.9748 78.5134 -1.1652 2 264.1356 38.3964 73.2994 -42.7581 3 182.7722 74.2692 97.7955 31.554 4 118.7494 57.6731 96.149 10.9517
ces.pos-masked.mean.stats
Measure:mean ctx-lh-pericalcarine ctx-lh-postcentral ctx-lh-superiortemporal Left-Hippocampus 0 198.2415 105.7526 107.1893 77.5613 1 232.2992 108.0577 121.9527 37.9277 2 336.5665 111.2593 136.4619 81.3814 3 196.1099 81.4932 127.5857 77.9514 4 120.5139 91.797 113.7618 39.2072