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#acl AdminGroup:read,write,delete,revert PedroOliveira:read,write,delete,revert All:read == FreeSurfer Tutorial and Workshop in São Paulo, Brazil == === 11 & 12 March 2009 === The FreeSurfer Development Team is hosting a two-day course for beginner and experienced users of FreeSurfer. Day 1 will be an introduction to FreeSurfer (or a refresher for those more experienced). Day 2 will cover everything you need to know for analyzing your data. Topics are listed below. There are only 30 available spots for this course. The course will not cover FS-FAST or fMRI analysis. Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer). The course will be held at São Paulo healthcare complex of HCFMUSP. Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br ) === Location === [[http://www.hcnet.usp.br/|Hospital das Clínicas]] - [[attachment:HospitaldasClinicas.kmz|.kmz|&do=get]] - [[http://maps.google.com/maps?q=Avenida%20Dr%20Eneas%20de%20Carvalho%20Aguiar%2C%2044%20-%20S%C3%A3o%20Paulo%20-%20SP%20-%20Brazil&oe=utf-8&rls=org.mozilla:en-US:official&client=firefox-a&um=1&ie=UTF-8&sa=N&hl=en&tab=wl|Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil]] - ([[http://www.atlanticahotels.com.br/atlantica%5Fing/hoteis/estrutura.asp?Numfuncionalidade=292&NumHotel=34&Cidade=S%E3o%20Paulo|hotel]],[[http://maps.google.com/maps?hl=en&q=rua%20Oscar%20Freire%2C%201948%20-%20Jardim%20Paulista%2C%20S%C3%A3o%20Paulo%20-%20SP%2C%2005409000%2C%20Brazil&um=1&ie=UTF-8&sa=N&tab=wl|map]]) The course will be held at the [[http://upload.wikimedia.org/wikipedia/commons/7/72/Hospitaldocancerdesp2.jpg|Cancer Center Building]], in the 6th floor auditorium. === Wednesday, March 11th - Introduction / Single Subject / Group Analysis === || '''Time''' || '''Title''' || '''Type''' || '''Lecturer''' || || 8:30 - 9:00 || Course Registration || sign-in || staff || || 9:00 - 9:20 || Introductions, and Unix tutorial for !FreeSurfer || tutorial || Pedro Paulo in Portuguese || || 9:20 - 9:50 || [[attachment:freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]] || talk || Nick Schmansky || || 9:50 - 10:30 || [[attachment:freesurfer.applications.2009b.ppt|FreeSurfer Applications|&do=get]] ([[attachment:freesurfer.applications.2009.ppt|suppl1|&do=get]],[[attachment:freesurfer.reliability.2009.ppt|suppl2|&do=get]])|| talk || Nick Schmansky|| || 10:30 - 10:45 || '''coffee break''' || || || || 10:45 - 11:45 || [[attachment:course_individual_subject.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Allison Stevens || || 11:45 - 12:00 || Tkmedit/Tksurfer demonstration || demo || Nick Schmansky || || 12:00 - 1:00 || '''lunch''' || || || || 1:00 - 1:45 || [[FsTutorial/OutputData|Interaction with Individual Subject Data]] || tutorial || staff || || 1:45 - 3:00 || [[attachment:freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Lilla Zollei || || 3:00 - 3:15 || QDEC demonstration || demo || Nick Schmansky || || 3:15 - 3:30 || '''coffee break''' || || || || 3:15 - 4:15 || [[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit]] || tutorial || staff || || 4:15 - 5:00 || [[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec]] || tutorial || staff || ## || 5:00 - || '''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] || one-on-one || Nick Schmansky / Pedro Paulo || ## || 5:00 - || '''optional -''' Start Processing Your Own Data || one-on-one || Allison Stevens / Lilla Zollei || === Thursday, March 12th - ROIs / Troubleshooting / Multi-Modal / QA / Future Directions === || '''Time''' || '''Title''' || '''Type''' || '''Lecturer''' || || 9:00 - 9:40 || [[attachment:fs.roi.ppt|ROI Analysis|&do=get]] || talk || Allison Stevens || || 9:40 - 10:15 || [[FsTutorial/AnatomicalROI|ROI Analysis]] || tutorial || staff || || 10:15 - 10:30 || '''coffee break''' || || || || 10:30 - 11:00 || [[attachment:freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Allison Stevens || || 11:00 - 12:00 || [[FsTutorial/TroubleshootingData|Troubleshooting]] || tutorial || staff || || 12:00 - 1:15 || '''lunch''' || || || || 1:15 - 2:15 || [[attachment:fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Lilla Zollei || || 2:15 - 3:15 || [[FsTutorial/MultiModal|Multi-Modal Integration]] || tutorial || staff || || 3:15 - 3:30 || '''coffee break''' || || || || 3:30 - 4:30 || [[attachment:LZ.future.directions.combined.short.ppt|Future Directions of FreeSurfer|&do=get]] || talk || Lilla Zollei || || 4:30 - 5:30 || Question and Answer Session, FsQuiz || group session || staff || * [[http://www.neuroimagem.com/evaluation|Evaluation form]] - Closed |
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