Diff for "FsTutorial/JuneNC2014CourseSchedule"

Differences between revisions 2 and 8 (spanning 6 versions)

FreeSurfer Course, North Carolina

Tuesday

Time	Title	Type
30m	optional - Unix Tutorial for FreeSurfer Users	talk/demo
30m	Introduction to Freesurfer	talk
1hr	Analyzing the Individual Subject	talk
20m	Freeview demonstration	demo
1hr	Interaction with Individual Subject Data Tutorial	tutorial

Wednesday

30m	FreeSurfer Troubleshooting	talk
1hr	Quality Checking a Recon	demo
1hr	Troubleshooting Tutorial	tutorial

Thursday

45m	Tracula Tutorial	tutorial
30m	ROI Analysis	talk
30m	ROI Analysis Tutorial	tutorial

Choose only one of these tutorials to do:
1hr	Group Analysis Tutorial	QDEC Tutorial

Additional Useful Information

During the Course

After the Course

Home page: http://surfer.nmr.mgh.harvard.edu
Publications
Mailing list: send mail to majordomo@surfer.nmr.mgh.harvard.edu with the following command in the body of your email message: subscribe freesurfer
How to cite FreeSurfer is on the FreeSurferMethodsCitation page.
iSurf - iPhone/iPad app to view FreeSurfer segmentations
Acknowledgements

FsTutorial/JuneNC2014CourseSchedule (last edited 2014-06-26 11:18:32 by AllisonStevens)

-  ⇤ ← Revision 2 as of 2014-06-20 23:15:51 → 
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+   ← Revision 8 as of 2014-06-26 11:18:32 → ⇥
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-Deletions are marked like this.
+Additions are marked like this.
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-||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' ||
||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||tutorial || Ender Konukoglu ||
||9:00 - 9:15 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] ||talk || Ender Konukoglu ||
||9:15 - 9:30 ||'''break''' || || ||
||9:30 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk || Bruce Fischl ||
||10:00 - 11:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || Bruce Fischl ||
||11:00 - 11:20 ||'''break''' || || ||
||12:00 - 1:00 ||'''Lunch''' ||-- ||-- ||
||1:00 - 1:20 ||Freeview demonstration ||[[FreeviewGuide|demo]] ||Louis Vinke ||
||1:20 - 2:20 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||2:20 - 2:50 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting|&do=get]] ||talk || Bruce Fischl ||
||2:50 - 3:10 ||'''break''' || || ||
||3:10 - 3:50 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt | Quality Checking a Recon]] ||demo ||Allison Stevens ||
||3:50 - 4:50 || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff ||
+||'''Time''' ||'''Title''' ||'''Type''' ||
||30m ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/NCJune2014/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||talk/demo ||
||30m ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/NCJune2014/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||
||1hr ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/NCJune2014/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||
||20m ||Freeview demonstration ||[[FreeviewGuide|demo]] ||
||1hr ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||
-Line 22:
+Line 14:
-##||5:00 - ||'''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] ||one-on-one || staff || ||
##||5:00 - ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]] ||one-on-one || staff ||      ||
+=== Wednesday ===
||30m ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/NCJune2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting|&do=get]] ||talk ||
||1hr || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt | Quality Checking a Recon]] ||demo ||
||1hr || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||
-Line 25:
+Line 19:
+=== Thursday ===
||45m ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||
||30m  ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/NCJune2014/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||
||30m  ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||
-Line 26:
+Line 24:
+||||'''Choose only one of these tutorials to do:'''||||
||1hr ||[[FsTutorial/GroupAnalysis|Group Analysis Tutorial]] ||[[FsTutorial/QdecGroupAnalysis_freeview|QDEC Tutorial]] ||
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-==== Wednesday ====
||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' ||
||11:40 - 12:00 ||QDEC demonstration ||demo || Doug Greve ||
||12:00 - 1:00 ||'''Lunch''' ||-- ||-- ||
||2:00 - 2:30  ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||Martin Reuter||
||2:30 - 2:50 ||'''break''' || ||
||2:50 - 3:20  ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff ||
+== Additional Useful Information ==
=== During the Course ===
 * [[QuickInstall|Download FreeSurfer]]
 * [[FsTutorial/Data|Getting the tutorial data]] 
 * [[FsTutorial/Scripts|Scripts & aliases mentioned during Unix talk]]
 * [[FsTutorial/Glossary|Glossary]]
 * [[https://surfer.nmr.mgh.harvard.edu/fswiki/MonkeyData|How to process Monkey data]]
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-==== Thursday ====
||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' ||
||9:00 - 9:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] ||talk ||Doug Greve ||
||10:40 - 11:40 ||[[FsFastTutorialV5.1_freeview|FSFAST Tutorial]] ||tutorial ||staff ||
||11:40 - 12:40 ||'''Lunch''' ||-- ||-- ||
+=== After the Course ===
 * Home page: http://surfer.nmr.mgh.harvard.edu
 * [[Publications]]
 * Mailing list: send mail to majordomo@surfer.nmr.mgh.harvard.edu with the following command in the body of your email message: subscribe freesurfer
 * How to cite !FreeSurfer is on the FreeSurferMethodsCitation page.
 * [[http://itunes.apple.com/us/app/isurf-brainview/id381072423?mt=8|iSurf]] - iPhone/iPad app to view !FreeSurfer segmentations
 * [[FsTutorial/Acknowledgements|Acknowledgements]]