iSurf - iPhone/iPad app
Nipype - Neuroimaging in Python, w/ FreeSurfer interfaces
Mindboggle-101 data - Manually labeled anatomical regions for 101 healthy subjects
MNE - M/EEG data analysis using FreeSurfer meshes and surface registration
Cgrid Toolbox - A toolbox for imposing cartesian grids on FreeSurfer ROIs
- MINC Toolkit
- Note: the MINC toolkit is already included in the Freesurfer 'full' installation (in $FREESURFER_HOME/mni)
- Pre-built binaries: