• Tutorials

FreeSurfer Tutorials

In order to run any of the freesurfer tutorials you must have valid freesurfer installation on your machine, and a local copy of the tutorial data.

Basics:

• Intro to FreeSurfer Output

• Troubleshooting FreeSurfer Output

• Group Analysis via command-line

• Group Analysis via GUI

• ROI Analysis

• Multimodal Analysis

Specialized topics:

• Longitudinal Processing, Edits and Post-Processing

• Diffusion Analysis

• Tracula Analysis

• FS-Fast, fMRI Analysis

• FSL-FreeSurfer integration

Old versions of tutorials which use tkmedit or tksurfer (no longer updated as of May 2014):

• Intro to FreeSurfer Output

• Group Analysis via command-line

• Group Analysis via GUI

• ROI Analysis

• Multimodal Analysis

• Longitudinal Processing, Edits and Post-Processing