Name

mri_concat

Description

Concatenates input data sets.

mri_concat.bin

--o out	Output
--i invol	Input
--f listfile	List file has a text list of files (up to 40000)
--paired-sum	Computes paired sum (1+2, 3d+4, ect.)
--paired-avg	Computes paired average (1+2, 3d+4, ect.)
--paired-diff	Computes paired difference (1-2, 3d-4, ect.)

|| --paired-diff-norm || Same as paired difference but scale by TP1, 2 average ||

--paired-diff-norm1	Same as paired difference but scale by TP1
--paired-diff-norm2	Same as paired difference but scale by TP2
--norm-mean	Normalize frames by mean of all TP
--norm1	Normalize frames by TP1
--mtx matrix.asc	Multiply by matrix in ascii file

|| --gmean Ng ||

-Deletions are marked like this.
+Additions are marked like this.
 Line 8:
+Concatenates input data sets.
-Line 10:
+Line 11:
-mri_segstats --seg <segvol> --annot <subject hemi parc> --slabel <subject hemi label> --sum <file>
+mri_concat.bin
-Line 14:
+Line 15:
-== Required Flagged Arguments ==

|| --seg segvol || input segmentation volume ||

|| --annot subject hemi parc || create a segmentation from hemi.parc.annot ||
+== Optional Flagged Arguments ==

|| --o out || Output ||

|| --i invol || Input ||

|| --f listfile || List file has a text list of files (up to 40000)||

|| --paired-sum || Computes paired sum (1+2, 3d+4, ect.) ||

|| --paired-avg || Computes paired average (1+2, 3d+4, ect.) ||

|| --paired-diff || Computes paired difference (1-2, 3d-4, ect.) ||

|| --paired-diff-norm || Same as paired difference but scale by TP1, 2 average || 

|| --paired-diff-norm1 || Same as paired difference but scale by TP1 ||

|| --paired-diff-norm2 || Same as paired difference but scale by TP2 ||

|| --norm-mean || Normalize frames by mean of all TP ||

|| --norm1 || Normalize frames by TP1 ||

|| --mtx matrix.asc || Multiply by matrix in ascii file ||

|| --gmean Ng ||