Index
Contents
Name
mri_extract_label
Description
This program will extract a set of labeled voxels from an image.
Synopsis
mri_extract_label [options] <input volume> <label 1> <label 2> ... <output name>
Arguments
Optional Flagged Arguments
-s <sigma> |
apply a Gaussian smoothing kernel |
-t <xform file> |
apply the transform in <xform file> to extracted volume |
-exit_none_found |
exit 1 if label(s) are not found |
-dilate <n> |
dilate output volume <n> times |
-erode <n> |
erode output volume <n> times |
--help or -u |
Prints out help information |
Examples
Example 1
mri_extract_label aseg.mgz 17 new.mgz
This command will extract the label for the left hippocampus from aseg.mgz and output it to new.mgz.
See Also
Links
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>