Index
Contents
Name
surf-sess - ??
Synopsis
surf-sess -analysis <analysisname> -contrast <contrsatname> [options]
Arguments
Required Flagged Arguments
General
-analysis <analysisname> |
session-level functional analysis name |
-contrast <contrastname> |
contrast name |
Session
-sf <sessidfile> |
-df <srchdirfile> |
-s <sessid> |
-d <srchdir> |
Optional Flagged Arguments
General
-map <mapname> |
<sig>, minsig, iminsig, t |
-offset <n> |
0-based image offset |
-hemi <hemisphere> |
<lh rh> |
-space <spacename> |
space from which to surf (<native>, tal, sph) |
-spacedir <spacedir> |
get data from spacedir |
-subject <subjectname> |
name of subject on which to paint (with group) |
-surf <surfacename> |
name of surface upon which to visualize |
-fthresh <fthreshvalue> |
color map threshold (2.0) |
-fmid <fmidvalue> |
middle of the color map (5.0) |
-fslope <fslopevalue> |
slope of the color scale (0.1) |
-smoothsteps <nsteps> |
spatial smoothing (2) |
-retinotopy <map> |
eccen, polar, fieldsign |
-flat |
display on flattened cortex (hemi.patch or hemi.occip.patch.flat for retinotopy) |
-patch <patchname> |
display on flattened hemi.patchname |
-old |
use old version of tksurfer |
Session
-umask <umask> |
set unix file permission mask |
-version |
print version and exit |
Ouputs
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Description
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Examples
Example 1
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Example 2
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Bugs
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See Also
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Links
Methods Description
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References
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>