Index

Name

surf-sess - ??

Synopsis

surf-sess -analysis <analysisname> -contrast <contrsatname> [options]

Arguments

Required Flagged Arguments

General

-analysis <analysisname>

session-level functional analysis name

-contrast <contrastname>

contrast name

Session

-sf <sessidfile>

-df <srchdirfile>

-s <sessid>

-d <srchdir>

Optional Flagged Arguments

General

-map <mapname>

<sig>, minsig, iminsig, t

-offset <n>

0-based image offset

-hemi <hemisphere>

<lh rh>

-space <spacename>

space from which to surf (<native>, tal, sph)

-spacedir <spacedir>

get data from spacedir

-subject <subjectname>

name of subject on which to paint (with group)

-surf <surfacename>

name of surface upon which to visualize

-fthresh <fthreshvalue>

color map threshold (2.0)

-fmid <fmidvalue>

middle of the color map (5.0)

-fslope <fslopevalue>

slope of the color scale (0.1)

-smoothsteps <nsteps>

spatial smoothing (2)

-retinotopy <map>

eccen, polar, fieldsign

-flat

display on flattened cortex (hemi.patch or hemi.occip.patch.flat for retinotopy)

-patch <patchname>

display on flattened hemi.patchname

-old

use old version of tksurfer

Session

-umask <umask>

set unix file permission mask

-version

print version and exit

Ouputs

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Description

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Examples

Example 1

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Example 2

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Bugs

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See Also

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Links

FreeSurfer, FsFast

Methods Description

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References

References/Lastname###

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

DougGreve