FreeSurfer Course, March 9-11, 2015

8:00 - 9:00am Registration Desk Open

Monday, March 9th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

9:00 - 9:30

optional - Unix Tutorial for FreeSurfer Users

talk/tutorial

Ani

9:30 - 9:45

optional - Intro to FreeSurfer Jargon

talk

Ani

9:45 - 10:15

Introduction to Freesurfer

talk

AY

10:15 - 10:45

break

10:45 - 11:45

Analyzing the Individual Subject

talk

Lee

11:45 - 12:00

Freeview demonstration

demo

Lee

12:00 - 1:00

Lunch

--

--

1:00 - 2:00

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:00 - 2:45

FreeSurfer Troubleshooting

talk

Ani

2:45 - 3:15

break

3:15 - 4:15

Troubleshooting Tutorial

tutorial

staff

4:15 - 5:15

Quality Checking a Recon

demo

Ani

Tuesday, March 10th - Group Analysis / ROI Analysis / Longitudinal

Time

Title

Type

Lecturer

9:00 - 9:40

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Iman

9:40 - 10:20

Group Analysis

talk

Anastasia Yendiki

10:20 - 10:50

break

10:50 - 11:30

Group Analysis Tutorial

tutorial

staff

11:30 - 12:00

Multiple Comparisons

talk

Anastasia Yendiki

12:00 - 1:00

Lunch

--

--

1:00 - 1:30

Multiple Comparisons Tutorial

tutorial

staff

1:30 - 2:00

ROI Analysis

talk

Lee

2:00 - 3:00

ROI Analysis Tutorial

tutorial

staff

2:00 - 3:30

break

3:30 - 4:00

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Iman

4:00 - 4:45

Longitudinal Tutorial

tutorial

staff

Wednesday, March 11th - Multimodal / Diffusion / Q&A

Time

Title

Type

Lecturer

9:00 - 10:00

Multi-Modal Integration

talk

Iman

10:00 - 10:30

Multi-Modal Integration Tutorial

tutorial

staff

10:30 - 11:00

break

11:00 - 11:30

Multi-Modal Integration Tutorial

tutorial

staff

11:30 - 12:10

Introduction to Diffusion MRI

talk

Anastasia Yendiki

12:10 - 1:10

Lunch

--

--

1:10 - 1:40

Registration Methods

talk

Iman

1:40 - 2:40

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Anastasia Yendiki

2:40 - 3:00

Tracula Tutorial

tutorial

staff

3:00 - 3:30

break

3:30 - 4:00

Tracula Tutorial

tutorial

staff

4:00 - 4:20

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff