FreeSurfer Course, May 5-7, 2014

8:00 - 9:30am Registration Desk Open

Monday, May 5th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

tutorial

RA

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

RA

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

?

10:00 - 11:10

Analyzing the Individual Subject

talk

?

11:10 - 11:30

break

11:30 - 12:10

12:10 - 1:10

Lunch (Suggestions for where to eat)

--

--

1:10 - 1:30

Freeview demonstration

demo

RA

1:30 - 2:30

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:30 - 3:00

FreeSurfer Troubleshooting

talk

RA

3:00 - 3:20

break

3:20 - 4:00

Quality Checking a Recon

demo

RA

4:00 - 5:00

Troubleshooting Tutorial

tutorial

staff

5:00 - 5:15

Question and Answer Session (Answers to online questions here)

talk

staff

Boston Beer Works location information here and here.
Meet us in front of Building 149 to catch the 6:15pm shuttle bus (it leaves on time!).
If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. Boston Beer Works will be down that street, on your right. (If you miss the 6:15 bus, the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).

Tuesday, May 6th - Group Analysis / ROI Analysis / Longitudinal

Time

Title

Type

Lecturer

9:00 - 9:40

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Lilla Zollei

9:40 - 10:20

Group Analysis

talk

Anastasia Yendiki

10:20 - 10:40

break

10:40 - 11:20

Group Analysis Tutorial

tutorial

staff

11:20 - 11:40

Multiple Comparisons

talk

Anastasia Yendiki

11:40 - 12:00

QDEC demonstration

demo

?

12:00 - 1:00

Lunch

--

--

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 2:30

ROI Analysis

talk

?

2:30 - 2:50

break

2:50 - 3:20

ROI Analysis Tutorial

tutorial

staff

3:20 - 3:50

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

? (not required)

3:50 - 4:30

Longitudinal Tutorial

tutorial

staff

4:30 - 5:05

Introduction to Diffusion MRI

talk

Anastasia Yendiki

5:05 - 6:05

Basics of fMRI Analysis

talk

? (not required)

6:05 - 6:20

Question and Answer Session (Answers to online questions here)

talk

staff

Wednesday, May 7th - fMRI / Multimodal / Future Directions / Q&A

Time

Title

Type

Lecturer

8:00 - 8:30

optional technical talk - Registration Methods

talk

Lilla Zollei

9:00 - 9:45

FSFAST

talk

? (not required)

9:45 - 10:00

break

10:00 - 10:40

FSFAST

talk

? (not required)

10:40 - 11:40

FSFAST Tutorial

tutorial

staff

11:40 - 12:40

Lunch

--

--

12:40 - 1:40

Multi-Modal Integration

talk

Lilla Zollei

1:40 - 2:55

Multi-Modal Integration Tutorial

tutorial

staff

2:55 - 3:15

break & Evaluation

3:15 - 4:05

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Anastasia Yendiki

4:05 - 4:50

Tracula Tutorial

tutorial

staff

4:50 - 5:20

Future Directions

talk

TBD

5:20 - 5:50

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff