Deletions are marked like this. | Additions are marked like this. |
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|| 8:30 - 9:00 || Course Registration || sign-in || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/boston_fs_course_jan2009.jpg|staff|&do=get]] || || 9:00 - 9:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl || || 9:30 - 10:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Bruce Fischl || |
|| 8:30 - 9:00 || Course Registration || sign-in || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/boston_fs_course_jan2009.jpg|staff|&do=get]] || || 9:00 - 9:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl || || 9:30 - 10:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Bruce Fischl || |
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|| 11:45 - 12:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || | || 11:45 - 12:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || |
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|| 1:15 - 2:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || | || 1:15 - 2:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || |
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|| 3:00 - 3:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Mert Sabuncu || | || 3:00 - 3:45 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Mert Sabuncu || |
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|| 5:45 - || '''optional -''' [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || | || 5:45 - || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || |
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|| 9:00 - 9:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || David Salat || || 9:30 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] || talk || Martin Reuter || || 10:00 - 10:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || |
|| 9:00 - 9:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || David Salat || || 9:30 - 10:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] || talk || Martin Reuter || || 10:00 - 10:45 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || |
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|| 11:00 - 11:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl|| | || 11:00 - 11:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl|| |
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|| 1:30 - 2:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] || talk || Doug Greve || | || 1:30 - 2:45 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] || talk || Doug Greve || |
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|| 4:00 - 4:20 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei || || 4:20 - 4:40|| [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 4:40 - 5:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || |
|| 4:00 - 4:20 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei || || 4:20 - 4:40|| [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 4:40 - 5:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || |
FreeSurfer Course, February 1 and 2, 2010
MGH, Charlestown Navy Yard, Building 149, Conference Room A
Monday, February 1st - Introduction / Single Subject / ROIs /Group Analysis
Time |
Title |
Type |
Lecturer |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly |
tutorial |
Allison Stevens |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
talk |
Bruce Fischl |
|
9:30 - 10:30 |
talk |
Bruce Fischl |
|
10:30 - 10:45 |
break |
|
|
10:45 - 11:15 |
Tkmedit/Tksurfer demonstration |
demo |
Doug Greve |
11:15 - 11:45 |
tutorial |
staff |
|
11:45 - 12:15 |
talk |
Doug Greve |
|
12:15 - 12:45 |
Working lunch Optional talk - Introduction to Diffusion Processing |
talk |
Lilla Zollei |
12:45 - 1:15 |
Working lunch Optional talk - MRI Acquisition Methods for Morphometry |
talk |
Andre van der Kouwe |
1:15 - 2:15 |
talk |
Doug Greve |
|
2:15 - 2:45 |
tutorial |
staff |
|
2:45 - 3:00 |
break |
|
|
3:00 - 3:45 |
talk |
Mert Sabuncu |
|
3:45 - 4:45 |
tutorial |
staff |
|
4:45 - 5:00 |
QDEC demonstration |
demo |
Nick Schmansky |
5:00 - 5:45 |
tutorial |
staff |
|
5:45 - |
optional - FreeSurfer Installation on Personal Laptops |
one-on-one |
Nick Schmansky |
5:45 - |
optional - Start Processing Your Own Data |
one-on-one |
Allison Stevens |
Tuesday, February 2nd - Troubleshooting / Multi-Modal / Q&A / Future Directions
Time |
Title |
Type |
Lecturer |
9:00 - 9:30 |
talk |
David Salat |
|
9:30 - 10:00 |
talk |
Martin Reuter |
|
10:00 - 10:45 |
talk |
David Salat |
|
10:45 - 11:00 |
break |
|
|
11:00 - 11:30 |
talk |
Bruce Fischl |
|
11:30 - 12:30 |
Troubleshooting, Troubleshooting demonstration |
tutorial |
staff, Allison |
12:30 - 1:00 |
Working lunch Optional demo - Step-by-Step Through a Recon |
demo |
TBD |
1:00 - 1:30 |
Working lunch Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain |
talk |
David Salat |
1:30 - 2:45 |
talk |
Doug Greve |
|
2:45 - 3:45 |
tutorial |
staff |
|
3:45 - 4:00 |
break |
|
|
4:00 - 5:00 |
Future Directions of FreeSurfer: |
|
|
4:00 - 4:20 |
talk |
Lilla Zollei |
|
4:20 - 4:40 |
talk |
Anastasia Yendiki |
|
4:40 - 5:00 |
talk |
Bruce Fischl |
|
5:00 - 5:30 |
Question and Answer Session, FsQuiz |
talk |
staff |