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Include system pages
  1. AeMir: BrainPET
  2. AgreeProb: CorticalParcellation_DU15NET
  3. AlanEzust: WhyWikiWorks
  4. AleksandrKoltsoff: WhyWikiWorks
  5. AlexandreDaSilva: ToDo/IncorporateExistingFreesurferGuides
  6. AlmostEqual2sComplement: mris_curvature_stats
  7. Anchor(Belliveau1991): References
  8. Anchor(Formatting): StyleGuidelines
  9. Anchor(Graphics): StyleGuidelines
  10. AndreasMeyerLindberg: Contributors
  11. AndrewCates: WhyWikiWorks
  12. AnttiKuntsi: WhyWikiWorks
  13. Application: tkregister2
  14. AuxVolume: FsTutorial/MultiModalDtiIndividual_tktools
  15. AvaSenkfor: ToDo/IncorporateExistingFreesurferGuides
  16. BR: FsTutorial/OutputData_tktools, FsTutorial/SkullStripFix_tktools, FsTutorial/WhiteMatterEdits_tktools, GrahamWideman, References, StyleGuidelines
  17. BarryKosofsky: Contributors
  18. BasicReconTable: BasicReconstruction
  19. BeginValueRangeFillInView: ScubaGuide/ScubaReference/ScubaScripting
  20. BigSur: CourseDescription/Remote_Qualify
  21. BioBank: ReleaseNotes
  22. BitNami: redmine
  23. BrainSegVol: FsTutorial/AnatomicalROI_tktools
  24. BruceFishl: mri_surf2surf
  25. BruceRosen: Contributors
  26. BslAgei: FsTutorial/QuestionAnswers
  27. Buckner40Notes/../../fswiki/FsTutorial/Data: Buckner40Notes
  28. CategoryFsFastCommandsSmoothing: spatialsmooth-sess
  29. CertUtil: CourseDescription/Remote_Qualify
  30. ColorLut: AnnotFiles
  31. Core2Duo: OrganizingFSCourse
  32. CorrectionMultipleComparisons: FsFastWorkFlows
  33. CorticalSurface: mri_surf2surf, mris_curvature, mris_euler_number, mris_glm
  34. CutPlane: recon-all
  35. DanielWakeman: mri_make_bem_surfaces, nu_correct, talairach2
  36. DanielWeinberger: Contributors
  37. DaphneRobakis: ToDo/IncorporateFsFastTutorial, selxavg-sess
  38. DartBoard: NextGenCode
  39. DarwinPortsStartup: HelpOnInstalling/FastCgi
  40. DavidCollantes: WhyWikiWorks
  41. DavidMattison: WhyWikiWorks
  42. DeFacing: MiDeFace, MiDeFace2
  43. DeHavenon: WMH-SynthSeg
  44. DeborahBlacker: Contributors
  45. DeletePage: WhyWikiWorks
  46. DepVar1: mri_gdfglm
  47. DepVar2: mri_gdfglm
  48. DepVars: mri_gdfglm
  49. DeviceNo: ScLimbic
  50. DiffFile: mri_diff
  51. DoOneValueRangeFill: ScubaGuide/ScubaReference/ScubaScripting
  52. DoneFile: mri_glmfit
  53. Download: AmazonCloud, DownloadAndInstall_long, Installation, License, UpcomingReleaseNotes
  54. DuBois: Publications
  55. EasyMeg: ThomasWitzel
  56. EditFreeSurferAsegs: SlicerWorkFlows
  57. EditVol: tkmedit-sess
  58. EditVoxels: recon-all
  59. EigenSystem: NumericalRecipesReplacement
  60. EinScan: PhotoTools
  61. EinsScan: PhotoTools
  62. EndValueRangeFillInView: ScubaGuide/ScubaReference/ScubaScripting
  63. EpiUnwarping: epidewarp.fsl
  64. ExampleProject/AdminGroup: AutoAdminGroup
  65. ExpertOptionsFile: SubmillimeterRecon
  66. ExtraCerebral: mri_compute_volume_fractions
  67. FaceNormCacheEntry: MorphoOptimizationProject_BetterSerialCode_DeferCalculations
  68. FarmQuestions: HelpOnInstalling/ApacheOnWin32withFastCgi
  69. FelixBreuer: WhyWikiWorks
  70. FemaleAmbi: Fsgdf6G0V
  71. FemaleLeft: Fsgdf4G0V, Fsgdf4G1V, Fsgdf6G0V
  72. FemaleRight: Fsgdf4G0V, Fsgdf4G1V, Fsgdf6G0V
  73. FibreAtlas: FsTutorial/ToursMay2016CourseSchedule
  74. FindClustersAndGotoMax: FsTutorial/QdecGroupAnalysis_tktools
  75. FischlData: JenniNotes
  76. FixVertexAreaFlag: FsAverage
  77. FreeDiffusionVisualizer: JoshSnyder
  78. FreeDiffusionWorkFlows: JoshSnyder
  79. FreeSrufer: infantFS-containers
  80. FreeSufer: recon-all
  81. FreeSurferApplication: TkRegister
  82. FreeSurferConformed: CerebellumParcellation_Buckner2011, StriatumParcellation_Choi2012
  83. FreeSurferConformed1mm: CerebellumParcellation_Buckner2011, StriatumParcellation_Choi2012
  84. FreeSurferDev: FreeSurferApplications, Scuba, ScubaGuide/GUI, ScubaGuide/ScubaGeneralUsage/ScubaQuickStart
  85. FreeSurferTutorial: FsFastTutorialV4.5/300_Download_data, ToolsAndCommands
  86. FreeView: DraftChallenges, FsTutorial/MultiModalRegistration_freeview, FsTutorial/OutputData_freeview, FsTutorial/OutputData_freeviewV6.0, FsTutorial/QuestionAnswers, HippocampalSubfields, HippocampalSubfieldsAndNucleiOfAmygdala, HypothalamicSubunits, LongitudinalHippocampalSubfields, ReleaseNotes, SynthSR, TeachYourselfFreeSurfer, ThalamicNuclei, infantFS-containers, makeagif
  87. FreesSurfer: HypothalamicSubunits
  88. FreeviewGuide/FreeviewReference/FreeviewMouseCommands: FreeviewGuide/FreeviewReference/FreeviewMenus
  89. FsFastAbBlockedAnalysis: FsFastWorkFlows
  90. FsFastGroupLevel/ClusterSummaryLh: FsFastTutorialV5.1/FsFastGroupLevel, FsFastTutorialV5.1/FsFastGroupLevel_freeview
  91. FsFastGroupLevel/ClusterSummaryMni305: FsFastTutorialV5.1/FsFastGroupLevel, FsFastTutorialV5.1/FsFastGroupLevel_freeview
  92. FsFastGroupLevel/ClusterSummaryRh: FsFastTutorialV5.1/FsFastGroupLevel, FsFastTutorialV5.1/FsFastGroupLevel_freeview
  93. FsFastGuide: FsFastOverview, FsFastTutorialV4.5/400_Get_familiar_with_sessions_format
  94. FsFastLinkAnatData: FsFastWorkFlows
  95. FsFastPreProc: FsFastTutorialV5.1/FsFastPreProc
  96. FsFastTutorial/ClusterSummary: FsFastTutorialV4.5
  97. FsFastTutorialV6.0/FsFastDirStruct_freeview: FsFastTutorialV6.0/TutorialData
  98. FsTutorial/ControlPoints: BasicReconstruction, FreeSurferBeginnersGuide, FsTutorial/Exercises, FsTutorial/MorphAndRecon, FsTutorial/TkmeditWorkingWithData, FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools, HistoricalReconstruction
  99. FsTutorial/Diffusion: FsTutorial/Amsterdam2012CourseSchedule, FsTutorial/April2011CourseSchedule, FsTutorial/April2012CourseSchedule, FsTutorial/Brazil2011CourseSchedule, FsTutorial/Dec2011CourseSchedule, FsTutorial/May2013CourseSchedule, FsTutorial/Nov2013CourseSchedule, FsTutorial/Oct2014CourseSchedule, FsTutorial/Sept2015CourseSchedule, FsTutorial/TraculaGroupAnalysis, Tutorials
  100. FsTutorial/Diffusion_DtiIntegration: FsTutorial/April2016CourseSchedule, FsTutorial/June2016GeorgetownCourseSchedule, FsTutorial/MultiModalFaStats, FsTutorial/MultiModalFmriGroup_freeview, FsTutorial/MultiModalFmriIndividual_freeview, FsTutorial/MultiModal_freeview, FsTutorial/Sept2016CourseSchedule, Tutorials
  101. FsTutorial/FuncOverlay: FsTutorial/SpmFreeSurfer
  102. FsTutorial/LongMixedEffects: FsTutorial/LongitudinalTutorial, FsTutorial/LongitudinalTutorialV5
  103. FsTutorial/LongProcessing: FsTutorial/LongitudinalTutorialV5
  104. FsTutorial/LongitudinalTutorialV6.0: FsTutorial/April2018CourseSchedule
  105. FsTutorial/LongitudinalTutorial_freeview: FsTutorial/April2016CourseSchedule, FsTutorial/April2017CourseSchedule, FsTutorial/BrazilMarch2015CourseSchedule, FsTutorial/LongSkullStripFix_freeview, FsTutorial/May2014CourseSchedule
  106. FsTutorial/MulitModalRegistration: FsTutorial/MulitModalFmri, FsTutorial/MulitModalFmriIndividual, FsTutorial/MultiModalFmriGroup_tktools, FsTutorial/MultiModalFmriIndividual_tktools
  107. FsTutorial/MultiModal: FsTutorial/Amsterdam2012CourseSchedule, FsTutorial/April2009CourseSchedule, FsTutorial/April2011CourseSchedule, FsTutorial/April2012CourseSchedule, FsTutorial/Brazil2009CourseSchedule, FsTutorial/CapeTown2010CourseSchedule, FsTutorial/Dec2011CourseSchedule, FsTutorial/Feb2010CourseSchedule, FsTutorial/Feb2011CourseSchedule, FsTutorial/Jan2009CourseSchedule, FsTutorial/May2013CourseSchedule, FsTutorial/MulitModalFmriIndividual, FsTutorial/MultiModalDtiIndividual_tktools, FsTutorial/MultiModalRegistration_tktools, FsTutorial/MultiModal_deleted_items, FsTutorial/Oct2010CourseSchedule, FsTutorial/Sept2009CourseSchedule, FsTutorial/StLouis2010CourseSchedule
  108. FsTutorial/MultiModalDtiIndividual_freeview: FsTutorial/MultiModalRegistration_freeview
  109. FsTutorial/MultiModalFmriGroup: FsTutorial/MultiModalDtiIndividual_tktools
  110. FsTutorial/MultiModalFmriIndividual: FsTutorial/MultiModalDtiIndividual_tktools, FsTutorial/MultiModalFmriGroup_tktools
  111. FsTutorial/MultiModalRegistration: FsFastTutorialV5.1/FsFastPreProc, FsTutorial/MultiModalDtiIndividual_tktools, FsTutorial/MultiModalFmriGroup_tktools
  112. FsTutorial/NavigateResampledParametricMap: FsTutorial/Exercises
  113. FsTutorial/October2018CourseSchedule: FsTutorial/CourseHistory
  114. FsTutorial/OutputData: FsTutorial/Amsterdam2012CourseSchedule, FsTutorial/April2009CourseSchedule, FsTutorial/April2011CourseSchedule, FsTutorial/April2012CourseSchedule, FsTutorial/Brazil2009CourseSchedule, FsTutorial/Brazil2011CourseSchedule, FsTutorial/CapeTown2010CourseSchedule, FsTutorial/Dec2011CourseSchedule, FsTutorial/Feb2010CourseSchedule, FsTutorial/Feb2011CourseSchedule, FsTutorial/Jan2009CourseSchedule, FsTutorial/June2009FslCourseSchedule, FsTutorial/June2010FslCourseSchedule, FsTutorial/June2011FslCourseSchedule, FsTutorial/June2013FslCourseSchedule, FsTutorial/May2012FslCourseSchedule, FsTutorial/May2013CourseSchedule, FsTutorial/MultiModal2009CourseSchedule, FsTutorial/MultiModal2010CourseSchedule, FsTutorial/MultiModal2011CourseSchedule, FsTutorial/MultiModal2012CourseSchedule, FsTutorial/MultiModal2013CourseSchedule, FsTutorial/Oct2010CourseSchedule, FsTutorial/Sept2009CourseSchedule, FsTutorial/StLouis2010CourseSchedule, FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools
  115. FsTutorial/OverlayFuncMapOntoStructural: FsTutorial/Exercises
  116. FsTutorial/PialEdits: BasicReconstruction, FsTutorial/Exercises, FsTutorial/MorphAndRecon, FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools, HistoricalReconstruction
  117. FsTutorial/QdecGroupAnalysis: FsTutorial/Amsterdam2012CourseSchedule, FsTutorial/April2009CourseSchedule, FsTutorial/April2011CourseSchedule, FsTutorial/April2012CourseSchedule, FsTutorial/Brazil2009CourseSchedule, FsTutorial/Brazil2011CourseSchedule, FsTutorial/CapeTown2010CourseSchedule, FsTutorial/Dec2011CourseSchedule, FsTutorial/Feb2010CourseSchedule, FsTutorial/Feb2011CourseSchedule, FsTutorial/GroupAnalysisDng, FsTutorial/GroupAnalysis_tktools, FsTutorial/Jan2009CourseSchedule, FsTutorial/June2009FslCourseSchedule, FsTutorial/June2010FslCourseSchedule, FsTutorial/June2011FslCourseSchedule, FsTutorial/June2013FslCourseSchedule, FsTutorial/LongitudinalTutorial_tktools, FsTutorial/May2012FslCourseSchedule, FsTutorial/May2013CourseSchedule, FsTutorial/MultiModal2009CourseSchedule, FsTutorial/MultiModal2010CourseSchedule, FsTutorial/MultiModal2011CourseSchedule, FsTutorial/MultiModal2012CourseSchedule, FsTutorial/MultiModal2013CourseSchedule, FsTutorial/Oct2010CourseSchedule, FsTutorial/Sept2009CourseSchedule, FsTutorial/StLouis2010CourseSchedule, FsTutorial/Visualization, FsgdExamples, LongitudinalTwoStageModel, PreviousReleaseNotes
  118. FsTutorial/ResampleFuncParametricMap: FsTutorial/Exercises
  119. FsTutorial/SkullStripFix: BasicReconstruction, FsTutorial/Exercises, FsTutorial/LongSkullStripFix, FsTutorial/LongSkullStripFix2, FsTutorial/MorphAndRecon, FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools, HistoricalReconstruction
  120. FsTutorial/TopologicalDefect: FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools
  121. FsTutorial/Troubleshooting: FsTutorial/MorphAndRecon
  122. FsTutorial/WhiteMatterEdits: BasicReconstruction, FreeSurferBeginnersGuide, FreeviewGuide/FreeviewWorkingWithData/FreeviewEditingaRecon, FsTutorial/ControlPoints_tktools, FsTutorial/Exercises, FsTutorial/MorphAndRecon, FsTutorial/TroubleshootingData_New, FsTutorial/TroubleshootingData_tktools, HistoricalReconstruction
  123. FsTutorialDataSet: FsTutorial/RegisterFeatOntoAnatomical.save
  124. FtpFileExchange: FreeSurferSupport
  125. Fugue: epidewarp.fsl
  126. GLM: mri_gdfglm
  127. GSLReplacement: NumericalRecipesReplacement
  128. GlobalMean: FsFastFunctionalConnectivityWalkthrough
  129. GotoSavedPoint: recon-all
  130. GrWiTestNewPage: GrahamWideman
  131. GradientCoil: PetSurfer
  132. GrahamWideman/MoinEditorBackup: GrahamWideman
  133. GroupAnalysis: FsFastTutorialV5.1/FsFastGroupLevel
  134. GroupDescriptorFile: mris_glm
  135. HTML(<iframe src="http:/spreadsheets.google.com/embeddedform?key=pre0SUd1Mx9mmA4FCai0nXQ" width="500" height="2714" frameborder="0" marginheight="0" marginwidth="0"></iframe>): FsTutorial/CourseEvaluation
  136. HaiyingLui: Contributors
  137. HelpOnCreoleSyntax/SubPage: HelpOnCreoleSyntax
  138. HelpOnMoinWikiSyntax/SubPage: HelpOnMoinWikiSyntax
  139. HeyHey: WhyWikiWorks
  140. HistoricalReconTable: HistoricalReconstruction
  141. HowTo: HowTo/HowTo
  142. ImageMagick: DraftChallenges, FsTutorial/OutputData_freeview, FsTutorial/OutputData_freeviewV6.0, makeagif
  143. ImageMagik: MiDeFace, MiDeFace2
  144. IndexOffset: mris_label2annot
  145. InitFieldLabel: mris_make_template
  146. InnerBackground: MiDeFace, MiDeFace2
  147. InnerTissue: MiDeFace, MiDeFace2
  148. InstallDocs: SyntaxReference
  149. InstitutionName: GradUnwarp
  150. IntraCranialVol: FsTutorial/AnatomicalROI_tktools
  151. IntroToScripting: TkSurferGuide/TkSurferScripting
  152. Introduction to FreeSurfer Output DRAFT: DraftChallenges
  153. IsRunning: UserContributions/FAQ
  154. JaneSmith: TumorSynth, fcseed-sess, fslregister-sess, mri_label2vol, mri_partial_ribbon, mris_divide_parcellation, mris_preproc
  155. JimmyMiller: WhyWikiWorks
  156. Joe Doe: AutoAdminGroup
  157. JoinCapitalizedWords: GrahamWidemanTest02
  158. JonStanley: WhyWikiWorks
  159. JudithSchaechter: ToDo/IncorporateFreeSurferCommands
  160. KatieHayes: Contributors
  161. KhoaNguyen: FsTutorial/LongitudinalTutorial_tktools
  162. L3Exp: BrainPET
  163. L4vH2: FsFastTutorialV4.5/940_Visualization
  164. Lab2Im: ScLimbic
  165. LabelROIs: VolumeROIGroupComparison
  166. LabelStyle: FsTutorial/OverlayFeatStatisticalMaps
  167. LeftRightRev: tksurfer
  168. LibreOffice: FsFslCourseSetup
  169. LillaZollei: mri_compute_overlap, mri_cvs_check, mri_cvs_data_copy, mri_cvs_register
  170. LineWriterHelperROIs: VolumeROIGroupComparison
  171. LoadDtiData: SlicerWorkFlows
  172. LoadFunctionalData: SlicerWorkFlows
  173. LoadLabel: mri_label2vol
  174. LoadMainSurface: recon-all
  175. LoadPatch: recon-all
  176. LongitudinalProcessing51: PreviousReleaseNotes
  177. LongitudinalQdecTable: LinearMixedEffectsModels, LongitudinalTwoStageModel
  178. LongitudnalProcessing: FsTutorial/Scripts
  179. LookupTable: infantFS-containers
  180. LooseMask: CerebellumParcellation_Buckner2011
  181. MacFall: GradUnwarp
  182. MacManus: Publications
  183. MacMini: ReconAllRunTimes
  184. MacroMarket: WhyWikiWorks
  185. MailTo(fswiki DASH help AT nmr DOT mgh DOT harvard DOT edu, fswiki-help): GettingAccess
  186. MaitalNeta: ToDo/IncorporateFsFastTutorial
  187. MaleAmbi: Fsgdf6G0V
  188. MaleLeft: Fsgdf4G0V, Fsgdf4G1V, Fsgdf6G0V
  189. MaleRight: Fsgdf4G0V, Fsgdf4G1V, Fsgdf6G0V
  190. ManufacturersModelName: GradUnwarp
  191. MariaMody: SusanMosher
  192. MarilynAlbert: Contributors
  193. MaritzaToDo: MaritzaEbling
  194. MatLab: LabelsClutsAnnotationFiles
  195. MatrixAlloc: MorphoOptimizationProject_BetterSerialCode_matrices
  196. MatrixAlloc2: MorphoOptimizationProject_BetterSerialCode_matrices
  197. MatrixBuffer: MorphoOptimizationProject_BetterSerialCode_matrices
  198. MatrixDeterminant: NumericalRecipesReplacement
  199. MatrixFree: MorphoOptimizationProject_BetterSerialCode_matrices
  200. MatrixMultiply: MorphoOptimizationProject_BetterSerialCode_matrices
  201. MauriceAlbert: WhyWikiWorks
  202. McCarley: Publications
  203. McCauley: Publications
  204. McCormick: Publications
  205. McDonald: Publications
  206. McGarvey: Publications
  207. McGlinchey: Publications
  208. McGrathc: Publications
  209. McGuire: FreeSurferMethodsCitation
  210. McGure: Publications
  211. McKaig: SynthSR
  212. McKee: HippocampalSubfields
  213. McNab: Fomblin
  214. MeDerek: WhyWikiWorks
  215. MniTalairach: FreeSurferFill
  216. MoinMaster: HelpOnDictionaries
  217. MotionCorrection: mc-sess, mri_motion_correct, mri_motion_correct2
  218. MoveToolWindow: gwcode_tksurfer_delink
  219. MrProt: mri_convert_mdh
  220. MriSiteData: PetSurfer
  221. MrisGlmGroupContrastVectorHelp: mris_glm
  222. MultiModalFmriIndividual: FsTutorial/MultiModalDtiIndividual_tktools
  223. MultiModalRegistration: FsTutorial/MultiModalDtiIndividual_tktools
  224. NaNs: bbregister
  225. NathanaelHevelone: Contributors, Testimonials, ToDo/IncorporateExistingFreesurferGuides, ToDo/IncorporateFreeSurferCommands
  226. NetworksConfidence: PreviousReleaseNotes
  227. NextBrain: ReleaseNotes
  228. NickHollingsworth: WhyWikiWorks
  229. NicoleAucoin: Contributors
  230. NonExistentHelpPage: HelpOnTemplates
  231. NouchineHadjikhani: Contributors, Testimonials, ToDo/IncorporateExistingFreesurferGuides
  232. NumVert: tksurfer_labeledit
  233. NuritGronau: ToDo/IncorporateFsFastTutorial
  234. OpenMatrixDeterminant: NumericalRecipesReplacement
  235. OpenOffice: FsTutorial/AnatomicalROI_tktools
  236. OpenSuse: ReleaseNotes
  237. OpenWiki: WhyWikiWorks
  238. OptimalPath: Scuba2Guide/ScubaWorkingWithData/Scuba2POI
  239. OptimalPathDensity: Scuba2Guide/ScubaWorkingWithData/Scuba2POI
  240. OptimalPathProbabilities: Scuba2Guide/ScubaWorkingWithData/Scuba2POI
  241. OptimalPathSamples: Scuba2Guide/ScubaWorkingWithData/Scuba2POI
  242. OtherUser: HelpOnMacros/MonthCalendar
  243. OuterBackground: MiDeFace, MiDeFace2
  244. OuterTissue: MiDeFace, MiDeFace2
  245. PackLabel: gwcode_tksurfer_labelresize
  246. PageName: HelpOnCreoleSyntax, HelpOnMoinWikiSyntax
  247. ParaVision: SmallBore
  248. PetSc: NextGenCode
  249. PeterMerel: WhyWikiWorks
  250. PhDs: FsTutorial/BarcelonaSept2017CourseSchedule
  251. PlanetTran: LcnNewMember
  252. PolyLine: FreeviewGuide/FreeviewTools/Measure
  253. PortForwarding: NmrClass
  254. PostStimulus: optseq2
  255. PowerShell: CourseDescription/Remote_Qualify, FSL_wsl_version_1
  256. PrActGivenComp: BrainmapOntology_Yeo2015
  257. PreStim: FsFastTutorialV4.5
  258. PreStimTimeWindow: mkanalysis-sess
  259. Prelude: epidewarp.fsl
  260. PrivatePageTemplate: HelpOnAutoAdmin
  261. PubMed: Publications
  262. PyTorch: WMH-SynthSeg
  263. PythonPath: HelpOnInstalling/ApacheWithModPython
  264. QdecGlmDesign: QdecProject/Xnat
  265. ROI: mri_vol2roi
  266. RangeToFile: TkMeditGuide/TkMeditReference/TkMeditScripting
  267. ReadPageTemplate: HelpOnAutoAdmin
  268. ReadWritePageTemplate: HelpOnAutoAdmin
  269. RecentChangesJunkies: WhyWikiWorks
  270. RecommendedReconTable: FsTutorial/ViewSegOutput
  271. ReconAllTableStableV7: ReconAllTableStableV6.0
  272. RedHat: RpmInfo
  273. RedmineServer: redmine
  274. ReduceToTridiagonalMatrixAndGetTransformation: NumericalRecipesReplacement
  275. RefTac: mri_glmfit
  276. References/Cox1999: mc-sess
  277. References/Lastname: mri_distance_transform, mri_fwhm, preproc-sess
  278. References/Lastname#: fcseed-sess, mris_divide_parcellation
  279. References/Lastname##: autoreg-sess, epidewarp.fsl, fslregister-sess, func2sph-sess, func2tal-sess, intergroupavg-sess, isxavg-re-sess, mergecontrasts-sess, mkanalysis-sess, mkcontrast-sess, mri%nl%align, mri_average, mri_ca_normalize, mri_cc, mri_em_register, mri_label2vol, mri_make_register, mri_make_template, mri_motion_correct, mri_motion_correct2, mri_parse_sdcmdir, mri_partial_ribbon, mri_probedicom, mri_register, mri_relabel_hypointensities, mri_rigid_register, mri_seghead, mri_synthesize, mri_vol2surf, mri_volcluster, mri_wmfilter, mris_curvature, mris_curvature_stats, mris_euler_number, mris_find_flat_regions, mris_flatten, mris_glm, mris_make_average_surface, mris_make_template, mris_preproc, mris_register, mris_smooth, mris_sphere, mris_spherical_average, mris_thickness, mris_twoclass, optseq2, pctsurfcon, plot-twf-sess, roisummary-sess, sfa-sess, sphsmooth-sess, spmregister-sess, surf-sess, tkmedit-sess, tkregister-sess, unpacksdcmdir
  280. References/Wu##: TumorSynth
  281. RegTemplateParcAtlas: GrahamWideman
  282. RegTemplateParcAtlas/AtlasCreate: GrahamWideman
  283. RegTemplateParcAtlas/AtlasUse: GrahamWideman
  284. RegTemplateParcAtlas/TemplateCreate: GrahamWideman
  285. RegTemplateParcAtlas/TemplateUse: GrahamWideman
  286. Registration: SetupConfiguration_Linux, SetupConfiguration_Mac, SystemRequirements
  287. RewriteRule: HelpOnConfiguration/ApacheVoodoo
  288. SaradaSivaraman: FsTutorial/LongitudinalTutorial_tktools
  289. SarahSteinvorth: ToDo/IncorporateFsFastTutorial
  290. SaveAs: recon-all
  291. SaveMainVolume: recon-all
  292. SavePoint: recon-all
  293. ScannerSerialNumber: GradUnwarp
  294. ScriptAlias: HelpOnInstalling/ApacheOnLinux
  295. Scuba2Guide/Scuba2GeneralUsage: Scuba2Guide
  296. Scuba2Guide/Scuba2Introduction: Scuba2Guide
  297. Scuba2Guide/Scuba2WorkingWithData: Scuba2Guide
  298. ScubaAnatomicalVolume: ScubaGuide/ScubaWorkingWithData/ScubaSegmentationVolumes
  299. ScubaAnatomicalVolumes: ScubaGuide/ScubaWorkingWithData/ScubaVolumeROIs
  300. ScubaGuide/ScubaWorkingWithData/ScubaAnatomicalVolumes ScubaAnatomicalVolume: ScubaGuide/ScubaWorkingWithData/ScubaFunctionalVolumes
  301. ScubaSegmentationVolumes: ScubaGuide/ScubaWorkingWithData/ScubaVolumeROIs
  302. ScubaWorkingWithData: ScubaGuide/ScubaWorkingWithData/ScubaAnatomicalVolumes
  303. SecondPage: HelpOnParsers/ReStructuredText
  304. SecureThreadPoolServer: HelpOnInstalling/StandaloneServer
  305. SegmentationROIs: VolumeROIGroupComparison
  306. SequenceDesign: FsFastSequenceDesign
  307. SessIdFile: FsFastTutorialV5.1/FsFastFirstLevel, FsFastTutorialV5.1/FsFastFirstLevel_freeview
  308. SetToolMode: ScubaGuide/ScubaReference/ScubaScripting
  309. SetUpFreeSurfer: FS7_wsl_centos
  310. ShockOffset: FsFastParametricModulation
  311. ShockSlope: FsFastParametricModulation
  312. SiblingPage: HelpOnCreoleSyntax, HelpOnMoinWikiSyntax
  313. SimDoneFile: mri_glmfit
  314. SingleFrame: BrainPET
  315. SkullStripFixV6: mri_gcut
  316. SkullStripping: mkbrainmask-sess
  317. Smoothing: FsFastSmooth
  318. SpeedComm: PedroOliveira
  319. SphericalAnalysis: FsFastSmooth
  320. SphericalSpace: FsFastComputeFixedEffectsAnalysis, FsFastComputeRandomEffectsAnalysis, FsFastSmooth
  321. StationName: GradUnwarp
  322. SubDirectory: FsFastTutorialV5.1/StudyAnswers, FsFastTutorialV6.0/StudyAnswers
  323. SubjectsDir: mris_glm
  324. SupraTentorial: MorphometryStats
  325. SurfReg: mris_preproc
  326. SyntaxReference/SubPage: SyntaxReference
  327. SynthDist: ReconAny, recon-all-clinical
  328. TableOfContents: TkMeditGuide/TkMeditReference/TkMeditMenus, mrisp_paint, selxavg-sess
  329. TalairachSpace: FsFastComputeFixedEffectsAnalysis, FsFastComputeRandomEffectsAnalysis
  330. TamaraKnutsen: ToDo/IncorporateFsFastTutorial
  331. TclScriptingGuide: ScriptingGuides
  332. TensorFlow: infantFS
  333. TheAnarcat: HelpOnVariables
  334. ThomasWaldmann: AutoAdminGroup, WhyWikiWorks
  335. ThreeScanner14: SamsegTesting
  336. TightMask: StriatumParcellation_Choi2012
  337. TimeSec: mri_glmfit
  338. TissueTypeSchema: PetSurfer
  339. TkMeditAnatomicalVolumes: TkMeditGuide/TkMeditReference/TkMeditMenus
  340. TkMeditControlPoints: TkMeditGuide/TkMeditWorkingWithData/TkMeditSelectionsLabels
  341. TkMeditGeneralUsage:TkMeditInterface: TkMeditGuide/TkMeditGeneralUsage/TkMeditQuickStart
  342. TkMeditInterface: TkMeditGuide/TkMeditGeneralUsage/TkMeditViewingArea
  343. TkMeditMouseCommands: TkMeditGuide/TkMeditReference/TkMeditMenus
  344. TkMeditNavigation: TkMeditGuide/TkMeditGeneralUsage/TkMeditViewingArea
  345. TkMeditReference:TkMeditCommandLineOptions: TkMeditGuide/TkMeditGeneralUsage/TkMeditQuickStart
  346. TkMeditSavingImages: TkMeditGuide/TkMeditGeneralUsage/TkMeditTips
  347. TkMeditScripting: TkMeditGuide/TkMeditReference/TkMeditMenus
  348. TkMeditSurfaces: TkMeditGuide/TkMeditWorkingWithData/TkMeditSelectionsLabels
  349. TkMeditTools: FreeSurferVersion3, SubcorticalSegmentation
  350. TkMeditViewingArea: TkMeditGuide/TkMeditReference/TkMeditMenus
  351. TkMeditWorkingWithData: TkMeditGuide/TkMeditGeneralUsage/TkMeditTips
  352. TkReg: ScubaFeatureComparison
  353. TkRegister2: FreeSurferApplications
  354. TkRegister2Guide: tkregister2
  355. TkRegisterGuide: TkRegister
  356. TkSurferFieldMask: TkSurferGuide/TkSurferScripting
  357. TkSurferFieldSign: TkSurferGuide/TkSurferWorkingWithData/TkSurferLabel
  358. TkSurferIntroToScripting: TkSurferGuide/TkSurferScripting
  359. TkSurferPatch: TkSurferGuide/TkSurferWorkingWithData/TkSurferLabel
  360. TkSurferReference: TkSurferGuide/TkSurferIntroduction
  361. TkSurferTimeCourse: TkSurferMenus
  362. TkTimer: TkMeditGuide/TkMeditReference/TkMeditMenus
  363. ToolBars: recon-all
  364. ToolSet: tkregister2
  365. TroubleshootingData: FsTutorial/OutputData_new
  366. TrustedEditorGroup: HelpOnTextChas
  367. TypeError: ReleaseNotes
  368. UplinkNetwork: FreeSurferWiki/Structure3DScanner
  369. UseNewOverlay: tksurfer
  370. UserList: UserPage
  371. VirtualBox: FS7_wsl, PreviousReleaseNotes, SystemRequirements
  372. VirtualHost: HelpOnConfiguration/ApacheVoodoo
  373. VolumeAnalysis: FsFastSmooth
  374. VolumeSpace: FsFastSmooth
  375. VoxelShiftMap: bbregister
  376. VtxMax: FsFastGroupLevel5.1/ClusterSummaryLh, FsFastGroupLevel5.1/ClusterSummaryRh, FsFastGroupLevel6.0/ClusterSummaryLh, FsFastGroupLevel6.0/ClusterSummaryRh, FsFastGroupLevel6.0/LHperm.th30.pos.sig.cluster.summary, FsFastGroupLevel6.0/MNIperm.th30.pos.sig.cluster.summary, FsFastGroupLevel6.0/RHperm.th30.pos.sig.cluster.summary, FsFastGroupLevel6.0Perm/LHperm.th30.pos.sig.cluster.summary, FsFastGroupLevel6.0Perm/MNIperm.th30.pos.sig.cluster.summary, FsFastGroupLevel6.0Perm/RHperm.th30.pos.sig.cluster.summary, FsTutorial/GroupAnalysisClusterSummary, mri_surfcluster
  377. WendyPlesniak: Contributors
  378. WikiHomepage: FirstnameLastname
  379. XgridLite: XgridNotes
  380. YouTube: Tracula
  381. [https:/fsl.fmrib.ox.ac.uk/fsl/fslwiki/eddy: FsTutorial/Tracula
  382. applyMorph: mri_cvs_register
  383. avnish.kumar@mgh.harvard.edu: Python
  384. createMorph: mri_cvs_register
  385. epdiewarp.fsl: trac-all-full
  386. exportGcam: mri_cvs_register
  387. fix: OtherUsefulFlags, ReconAllDevTable, ReconAllTableStableV5, ReconAllTableStableV5.1, ReconAllTableStableV5.3
  388. free link: WikiCourse/16 Wiki internal links
  389. fswiki: AnatomiCuts_correspondences, LegionLibrary, gwcode_tksurfer_delink, gwcode_tksurfer_labelresize
  390. func2sph: func2tal-sess
  391. func2tal: func2sph-sess, func2tal-sess
  392. isxavg-fe-sess: FsFastCommands, FsFastComputeFixedEffectsAnalysis, func2roi-sess, isxavg-re-sess, sphsmooth-sess
  393. isxavg-re: isxavg-re-sess
  394. make_final_surfaces: make_average_subject, make_average_volume
  395. mincaverage: mri_motion_correct2
  396. mincresample: mri_motion_correct2
  397. minctracc: mri_motion_correct2
  398. mkanalysis-sess -gui: isxconcat-sess
  399. mkanalysis-sess.gui: selxavg3-sess
  400. mkanalysis-sess.new: FsFastCommands, FsFastIndividualRetinotopyAnalysis, intergroupavg-sess, preproc-sess, roisummary-sess, selxavg3-sess
  401. morph_subject: make_average_subject, make_average_volume
  402. mri_fuse_segmentations: LongitudinalChangeLog
  403. mri_nl_align: mri_cvs_register
  404. mri_probe_ima: FreeSurferCommandsVolumeMisc
  405. mris_extract_main_component: ReconAllStableTablev4, ReconAllTableStableV5, ReconAllTableStableV5.1, tessellate
  406. mris_remove_intersection: ReconAllStableTablev4, ReconAllTableStableV5, ReconAllTableStableV5.1, TopologyFixer
  407. mris_resample: mri_cvs_register
  408. mris_surf2vol: FreeSurferCommands
  409. mris_topo_fixer: LongitudinalProcessing, LongitudinalProcessing45
  410. nmovie: FreeSurferCommandsSurfaceMisc
  411. other page: WikiCourse/16 Wiki internal links
  412. othercommand1: TumorSynth, fcseed-sess, mc-sess, mergecontrasts-sess, mkanalysis-sess, mkbrainmask-sess, mri%nl%align, mri_average, mri_ca_normalize, mri_distance_transform, mri_make_register, mri_matrix_multiply, mri_motion_correct, mri_parse_sdcmdir, mri_partial_ribbon, mri_probedicom, mri_register, mri_relabel_hypointensities, mri_rigid_register, mri_seghead, mri_vol2roi, mri_vol2surf, mri_volcluster, mri_volsynth, mri_wmfilter, mris2rgb, mris_curvature, mris_divide_parcellation, mris_euler_number, mris_find_flat_regions, mris_fix_topology, mris_glm, mris_register, mris_smooth, mris_sphere, mris_spherical_average, mris_thickness, mris_twoclass, optseq2, sfa-sess, spmregister-sess, tkmedit-sess, unpacksdcmdir
  413. othercommand2: TumorSynth, fcseed-sess, mc-sess, mkanalysis-sess, mri%nl%align, mri_average, mri_ca_normalize, mri_distance_transform, mri_make_register, mri_matrix_multiply, mri_motion_correct, mri_parse_sdcmdir, mri_partial_ribbon, mri_probedicom, mri_register, mri_relabel_hypointensities, mri_rigid_register, mri_seghead, mri_vol2roi, mri_vol2surf, mri_volcluster, mri_volsynth, mri_wmfilter, mris2rgb, mris_curvature, mris_divide_parcellation, mris_euler_number, mris_find_flat_regions, mris_fix_topology, mris_glm, mris_make_average_surface, mris_preproc, mris_register, mris_smooth, mris_sphere, mris_spherical_average, mris_thickness, mris_twoclass, optseq2, plot-twf-sess, sfa-sess, spmregister-sess, unpacksdcmdir
  414. recon-all-nmr: mri_strip_skull
  415. spm2bfloat: FreeSurferCommandsVolumeConversion
  416. stxgrinder-sess: FsFastCommands, FsFastComputeFixedEffectsAnalysis, FsFastTutorialV4.5/920_Compute_statistical_maps_of_the_omnibus_contrast, func2roi-sess, mkcontrast-sess
  417. talairach_mgh: FreeSurferCommandsTalairach
  418. tkregister: FreeSurferCommandsRegistration, FreeSurferTalairach, TkRegister, regdat2xfm
  419. tksurfer-sess: FsFastVisualizeIndividualSurface
  420. wm-anat-snr: pctsurfcon
  421. www.tmb.cat/en/home: FsTutorial/BarcelonaSept2017CourseSchedule

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